Gene Information

Name : WcaJ (TTE0665)
Accession : NP_622327.1
Strain : Thermoanaerobacter tengcongensis MB4
Genome accession: NC_003869
Putative virulence/resistance : Virulence
Product : lipopolysaccharide synthesis sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 667455 - 668060 bp
Length : 606 bp
Strand : +
Note : Best Blastp hit = gi|7449885|pir||D70037 capsular polysaccharide biosynthesis homolog yvfC - Bacillus subtilis gi|1495291|emb|CAA96480.1| (Z71928) hypothetical protein [Bacillus subtilis] gi|1945702|emb|CAB07996.1| (Z94043) hypothetical protein [Bacillus

DNA sequence : 
TTGAAATTAATTATAAAAAGATTAATTGACATTTTTGTATCACTTTTTTTGTTAATTATTTTGTCTCCTTTTTTAGTCAT
CATATCGCTAATTGTTTTTGTTGCTATGGGACCGCCTGTTATATATAAACAGACAAGAGCGGGGTTTAAAGGAAAGCCTT
TTACAATATATAAATTTAGGACAATGACTAATGAAAAAGATGAATATGGTAATCTTTTACCAGATGAAAAACGCCTGACT
AAAATGGGTAAATTCCTTAGAAGTACAAGTCTTGACGAGTTACCGGAATTATTTAATGTTTTAAAAGGAGATATGAGCTT
AGTGGGGCCAAGACCCTTACTTATGGAATATTTGAATTATTATACAGAAGAACAAATGAGACGTCATGATGTAAAGCCAG
GTATAACTGGTTGGGCACAAGTAAATGGACGCAATAGTCTTTCTTGGGAAGAGAAATTTAAACTTGATGTATGGTATGTA
GATAATTGGAGTTTATGGCTGGATTTTAAAATATTATTCTTAACACTTATAAAAGTAATAAAAAGGGAAGGTCTTTCTGC
TGAAGGTTATGCTACAATGCCAAAATTTACGGGAAGTAAAGATTAA

Protein sequence : 
MKLIIKRLIDIFVSLFLLIILSPFLVIISLIVFVAMGPPVIYKQTRAGFKGKPFTIYKFRTMTNEKDEYGNLLPDEKRLT
KMGKFLRSTSLDELPELFNVLKGDMSLVGPRPLLMEYLNYYTEEQMRRHDVKPGITGWAQVNGRNSLSWEEKFKLDVWYV
DNWSLWLDFKILFLTLIKVIKREGLSAEGYATMPKFTGSKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 1e-24 47
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 7e-24 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
WcaJ NP_622327.1 lipopolysaccharide synthesis sugar transferase VFG1369 Protein 1e-21 46
WcaJ NP_622327.1 lipopolysaccharide synthesis sugar transferase VFG1309 Protein 2e-23 41