Gene Information

Name : OmpR (TTE0481)
Accession : NP_622157.1
Strain : Thermoanaerobacter tengcongensis MB4
Genome accession: NC_003869
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 491950 - 492627 bp
Length : 678 bp
Strand : +
Note : Best Blastp hit = gi|6687469|emb|CAB64972.1| (AJ012050) VicR protein [Enterococcus faecalis], score 216, E-value 2.00E-55

DNA sequence :
GTGGAGAGATTGCTTATCATAGATGACGAAGAAATGTTTGTTAAGGGATTGAAACTTTCTTTAGAAGAGGAAGGATTTGA
AGTGGATGCGGCTTACGATGGGGAGGAGGGGCTTGAAAAGGTCAGAATAGGAAATTACGACCTGGTTATTCTTGATATAA
TGCTTCCTAAAATGGATGGTTTCTCAGTTTGTAGAGAAATAAGGACTTTTTCAAACATTCCAATAATAATGCTTACTGCA
AGGGGAGACGATGTGGATAGAATTGTCGGGATAGAAATAGGAGCAGATGACTATCTAGCAAAGCCTTTCAATACTCGAGA
GTTGATTGCAAGAATTAGGGCTCTTTTAAGAAGAGCGTCAAATCCCTATGTGAAGAAAAAAGAAGAGATAAGAAGGGGAG
ATTTGTATATTAACATTCCTGAGAGGGCAGTTTACAAAAGAGGTAAAAAGATTGAGCTCACAAATAAGGAGTTTGAAATA
CTAGTGCTTTTAGCTTCTAATCCCGGCAAAGTGTACACAAAGGATAAGCTTTTAGATCTCATATGGGGTGTTGATTTTTA
TGGCGATGCGAACACAGTGACAGTGCATGTGAGGAAGCTCAGGGAAAAATTAGAGGATGACCCTGCTAATCCCCAGTACA
TTTTTACCAAATGGGGAGCGGGATATTACATGAAATAG

Protein sequence :
MERLLIIDDEEMFVKGLKLSLEEEGFEVDAAYDGEEGLEKVRIGNYDLVILDIMLPKMDGFSVCREIRTFSNIPIIMLTA
RGDDVDRIVGIEIGADDYLAKPFNTRELIARIRALLRRASNPYVKKKEEIRRGDLYINIPERAVYKRGKKIELTNKEFEI
LVLLASNPGKVYTKDKLLDLIWGVDFYGDANTVTVHVRKLREKLEDDPANPQYIFTKWGAGYYMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OmpR NP_622157.1 response regulator NC_002952.2859905.p0 Protein 1e-42 47
OmpR NP_622157.1 response regulator NC_002758.1121668.p0 Protein 9e-43 47
OmpR NP_622157.1 response regulator NC_009641.5332272.p0 Protein 9e-43 47
OmpR NP_622157.1 response regulator NC_013450.8614421.p0 Protein 9e-43 47
OmpR NP_622157.1 response regulator NC_007622.3794472.p0 Protein 1e-42 47
OmpR NP_622157.1 response regulator NC_007793.3914279.p0 Protein 9e-43 47
OmpR NP_622157.1 response regulator NC_003923.1003749.p0 Protein 9e-43 47
OmpR NP_622157.1 response regulator NC_002745.1124361.p0 Protein 9e-43 47
OmpR NP_622157.1 response regulator NC_009782.5559369.p0 Protein 9e-43 47
OmpR NP_622157.1 response regulator NC_002951.3237708.p0 Protein 9e-43 47
OmpR NP_622157.1 response regulator AF155139.2.orf0.gene Protein 1e-37 46
OmpR NP_622157.1 response regulator NC_012469.1.7685629. Protein 2e-43 44
OmpR NP_622157.1 response regulator BAC0125 Protein 5e-33 44
OmpR NP_622157.1 response regulator NC_005054.2598277.p0 Protein 1e-34 44
OmpR NP_622157.1 response regulator NC_014475.1.orf0.gen Protein 1e-34 44
OmpR NP_622157.1 response regulator AE000516.2.gene3505. Protein 7e-39 44
OmpR NP_622157.1 response regulator FJ349556.1.orf0.gene Protein 3e-38 43
OmpR NP_622157.1 response regulator CP000034.1.gene3671. Protein 5e-34 43
OmpR NP_622157.1 response regulator CP000675.2.gene1535. Protein 1e-33 42
OmpR NP_622157.1 response regulator NC_002951.3238224.p0 Protein 5e-30 42
OmpR NP_622157.1 response regulator NC_007793.3914065.p0 Protein 5e-30 42
OmpR NP_622157.1 response regulator NC_002758.1121390.p0 Protein 5e-30 42
OmpR NP_622157.1 response regulator NC_010079.5776364.p0 Protein 5e-30 42
OmpR NP_622157.1 response regulator NC_002952.2859858.p0 Protein 5e-30 42
OmpR NP_622157.1 response regulator NC_007622.3794948.p0 Protein 5e-30 42
OmpR NP_622157.1 response regulator NC_003923.1003417.p0 Protein 5e-30 42
OmpR NP_622157.1 response regulator NC_013450.8614146.p0 Protein 5e-30 42
OmpR NP_622157.1 response regulator BAC0083 Protein 8e-29 42
OmpR NP_622157.1 response regulator AM180355.1.gene1830. Protein 5e-31 41
OmpR NP_622157.1 response regulator AE016830.1.gene1681. Protein 8e-35 41
OmpR NP_622157.1 response regulator HE999704.1.gene2815. Protein 6e-34 41
OmpR NP_622157.1 response regulator NC_012469.1.7686381. Protein 7e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OmpR NP_622157.1 response regulator VFG0596 Protein 1e-29 41
OmpR NP_622157.1 response regulator VFG1389 Protein 2e-28 41