Gene Information

Name : Ssb3 (TTE2780)
Accession : NP_624280.1
Strain : Thermoanaerobacter tengcongensis MB4
Genome accession: NC_003869
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2670877 - 2671329 bp
Length : 453 bp
Strand : -
Note : Best Blastp hit = gi|586039|sp|P37455|SSB_BACSU SINGLE-STRAND BINDING PROTEIN (SSB) (HELIX-DESTABILIZING PROTEIN) gi|2127217|pir||S66014 single-stranded DNA-binding protein ssb - Bacillus subtilis gi|467374|dbj|BAA05220.1| (D26185) single strand DNA bindi

DNA sequence : 
ATGTTAAATAAAGTAATTCTGATAGGCCGCTTGACAAAAGACCCTGTCATGAGGTATACCTCTGACATGGTTCCTGTTAC
TACCTTTACACTGGCGGTTAACAGGAACTATGTGAGCCAGAGCGGGGAAAGGCCTACAGATTTTATACCCATCGTCACGT
GGAGAAAGCTGGCGGAAATCTGTGCTAACAATCTAAAAAAAGGGAGACTAGTAGCGGTTACAGGGAGTATACAGACAAGG
ACATGGGATGACAGCAGTGGTAACCGCCATTGGGTCACTGAAGTGGTAGCAGATGATGTGAGATTCTTAGAGCCTAAATC
TGGCTTTGGTAGTGGCAGCGCTCCAGAAGAGGAGAAAGAATTGGATGAAGATTTTGATAAGCTATTCGAAGACATCCCCG
ACGATTTTGATGGGTTTACGCCTATAGAGAGCGAAGATGACTTGCCTTTTTAA

Protein sequence : 
MLNKVILIGRLTKDPVMRYTSDMVPVTTFTLAVNRNYVSQSGERPTDFIPIVTWRKLAEICANNLKKGRLVAVTGSIQTR
TWDDSSGNRHWVTEVVADDVRFLEPKSGFGSGSAPEEEKELDEDFDKLFEDIPDDFDGFTPIESEDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 9e-26 58
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 4e-25 57
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 6e-24 56
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 4e-25 56
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 7e-25 55
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 5e-22 44
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 7e-22 44