Gene Information

Name : CcmA9 (TTE1863)
Accession : NP_623446.1
Strain : Thermoanaerobacter tengcongensis MB4
Genome accession: NC_003869
Putative virulence/resistance : Resistance
Product : multidrug ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1807195 - 1808133 bp
Length : 939 bp
Strand : -
Note : Best Blastp hit = gi|10175837|dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus halodurans], score 332, E-value 5.00E-90

DNA sequence :
TTGGCTGATGTTGTAATAGAGCTAAAAGGTCTCACTAAAATCTATGGTACTCAGCCAGCCGTCGACCATCTGGATTTAGA
GATAAAAAGAGGAGAGGTTTTTGGACTTTTGGGCCCTAATGGTGCGGGCAAAACTACTACTATTTTAATGATATTAGGCC
TTGTGGAACCAACCGAGGGGGAAGTAAAAGTTTTAGGGATTAATTCAACGCGAGAGCCACTTAAAGTAAAAAAATGGGTT
GGCTATTTGCCCGAGGATGTCGGGTTTTATGAAGACATGACAGGGCTTGAGAATCTGAAGCTCACTGCTGCTTTAAACGG
TATGGAGGAGAAAGAAGCGGTAAAAGCAGCAGAAGAACTGCTTGAAAAGGTGGGGCTTGGGGAAGCTAAAGACAAAAAAG
TGGGAGCATATTCCAGAGGCATGAGGCAGAGACTGGGGCTTGCAGATGCCCTTATAAAAAAACCTCAGATAGTGATTCTC
GATGAGCCGACTTTAGGGCTTGACCCGGAGGGGATGAAAGAATTTTTGGAACTCATAAAGAATTTGAGCAGAGAAGGCGG
TATGACTGTTCTTTTGTCTTCTCACCATCTCCATCAAGTTCAGGAGATATGCGATAGAGTAGGGATATTTGTAAAAGGGA
AGCTAATAGCAAAAGGTACTGTGTCGGAACTGGCAAAAGAGCTGTTTTCTACAGAACTTTACACCTTTGAAGTTGCTGTT
AATCCTATGGAGGATGACCTTATTTCCAAACTTATGAGTGTGGAAGGCGTGAAAAAAGTAGAAAAGGAAGGTAAAGCCTT
CATCGTCCATGCTGAAAAAGACGTTTCTGCTGAAGTTGCCAAAACTGTGGTAAAGGAAGGCTATAATCTTGTAAGGCTTA
TGCCTAAAAGCTATGGATTAGATGATATTTACCATCGCTATTTTGAGGGGGTGCAATAA

Protein sequence :
MADVVIELKGLTKIYGTQPAVDHLDLEIKRGEVFGLLGPNGAGKTTTILMILGLVEPTEGEVKVLGINSTREPLKVKKWV
GYLPEDVGFYEDMTGLENLKLTAALNGMEEKEAVKAAEELLEKVGLGEAKDKKVGAYSRGMRQRLGLADALIKKPQIVIL
DEPTLGLDPEGMKEFLELIKNLSREGGMTVLLSSHHLHQVQEICDRVGIFVKGKLIAKGTVSELAKELFSTELYTFEVAV
NPMEDDLISKLMSVEGVKKVEKEGKAFIVHAEKDVSAEVAKTVVKEGYNLVRLMPKSYGLDDIYHRYFEGVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 2e-23 42
cdd4 CAA63569.1 - Not tested PaLoc Protein 4e-34 42
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 6e-33 41