Gene Information

Name : fliP (TTE1426)
Accession : NP_623044.1
Strain : Thermoanaerobacter tengcongensis MB4
Genome accession: NC_003869
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1405708 - 1406373 bp
Length : 666 bp
Strand : -
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence :
ATGGATTTAAGTAATTTGGTGTCCTCTGTTACTTCTCCTTCTAATTTATCTACGAGTTTGCAAATTGTACTTTTGCTCAC
AGTTTTGACCCTTGCACCTTCTATACTCATAATGATGACCTCTTTTACGAGAATAGTCATTGTGCTGGCCTTCTTGAGAA
ATGCTTTAGGGCTTCAGCAGATGCCGCCTAATCAGGTGTTGATTGGGTTGGCTTTGTTCCTCACCTTTTACATAATGGCA
CCTGTTGGATATGACATAAACAACAATGCCATAAAACCCTATGTGGAAGGTCAAATAAACCAGTATGAAGCTTATCAGAG
AGCAATCAAACCCCTAAAAAACTTTATGTTAAGGCAGACAAGGCAAAATGACCTTGCGCTTTTTGTGAATCTCGCAAAGA
TTAAAGTAGACAAGGTAGAAGACCTCCCCATGAGAGTTGTAATACCTGCTTTTATAATAAGCGAGTTGAAGACAGCTTTT
GAGATAGGATTTATAATCTACATCCCGTTTTTAGTAATAGATATAATTGTTGCCAGTGTGCTCATGTCAATGGGAATGTT
CATGTTGCCACCTGTTTTGATATCTCTGCCATTTAAAGTGCTTCTTTTCATTCTTGTAGATGGGTGGAATTTGGTAGTTA
AGTCTCTCATTTTAGGTTTTAGATAA

Protein sequence :
MDLSNLVSSVTSPSNLSTSLQIVLLLTVLTLAPSILIMMTSFTRIVIVLAFLRNALGLQQMPPNQVLIGLALFLTFYIMA
PVGYDINNNAIKPYVEGQINQYEAYQRAIKPLKNFMLRQTRQNDLALFVNLAKIKVDKVEDLPMRVVIPAFIISELKTAF
EIGFIIYIPFLVIDIIVASVLMSMGMFMLPPVLISLPFKVLLFILVDGWNLVVKSLILGFR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 8e-24 44
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 9e-24 43
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 3e-30 42
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 3e-30 42
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 2e-32 41
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 2e-32 41
unnamed AAL06354.1 EscR Virulence LEE Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP NP_623044.1 flagellar biosynthesis protein FliP VFG1259 Protein 1e-52 59
fliP NP_623044.1 flagellar biosynthesis protein FliP VFG2016 Protein 8e-51 58
fliP NP_623044.1 flagellar biosynthesis protein FliP VFG2338 Protein 2e-48 56
fliP NP_623044.1 flagellar biosynthesis protein FliP VFG2494 Protein 6e-50 56