Gene Information

Name : MA3984 (MA3984)
Accession : NP_618853.1
Strain : Methanosarcina acetivorans C2A
Genome accession: NC_003552
Putative virulence/resistance : Virulence
Product : helix-turn-helix family protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 4888332 - 4888535 bp
Length : 204 bp
Strand : +
Note : -

DNA sequence :
ATGAAGAACAATATTAAAGTTTACAGGGCAATTCATGACCTTACCCAGGAAAACCTTGCGGAAAAGGTGGGAGTAACAAG
GCAGACGATAAATGCTATTGAGAAAGGAAAGTATGATCCCTCTCTCGATCTTGCATTCAAGCTTTCCAGACTCTTTAAAG
CAAGCGTTGAAGATATCTTTCTCTATGAGAGCAACGAGAAATGA

Protein sequence :
MKNNIKVYRAIHDLTQENLAEKVGVTRQTINAIEKGKYDPSLDLAFKLSRLFKASVEDIFLYESNEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-12 54
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 7e-08 45
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 5e-08 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MA3984 NP_618853.1 helix-turn-helix family protein VFG2168 Protein 2e-08 45
MA3984 NP_618853.1 helix-turn-helix family protein VFG2175 Protein 2e-08 45