Gene Information

Name : MA3957 (MA3957)
Accession : NP_618828.1
Strain : Methanosarcina acetivorans C2A
Genome accession: NC_003552
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4854227 - 4854868 bp
Length : 642 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAGTTACGTGCTTGGGGACATGAAAGTTCCGGTACTCTCAGATATTAACCTGAAAATCGAAAAAGGAGAATTTCT
AGCTATTATGGGCCCATCAGGTTCGGGAAAAAGTACTCTTATGAACCTGATAGGCTGTCTTGATCGGCCGACAGAAGGGA
GGATCCTTATAAGGGGGAGGGACCTGCATAGAATGTCAGATGAAGAACTAGCCCGAATCCGAGGGCTTGAGATAGGGTTC
GTTTTTCAGACTTTCAACCTTGTTCCTCGTCTGACTGCTATTGAGAATGTTTTGCTTCCTACTTTTGCAAATTCAAGGAG
CAACGATCCGCAAAAACGTGCAAAGGAACTCCTGCAACTTATGGGATTACAGGACCGCATGCACCATAGGCCAGGAGAGC
TTTCCGGAGGCCAATCTCAGAGGGTCTCGATTGCAAGGGCCCTCATCAATAATCCTTCAATTCTCCTTGCTGACGAACCG
ACCGGGAACCTGGATTCGAAAACGGGTTCTGAGATCCTCCAGATATTCATGGATTTGAACAATGAGGGGAGGACAGTAGT
AATAGTTACACACGACCCTGAAATTGCAAAATATGCTGACAGGGTTGTCCTAGTAAAAGATGGGGAAATTAAATATAATT
AA

Protein sequence :
MKSYVLGDMKVPVLSDINLKIEKGEFLAIMGPSGSGKSTLMNLIGCLDRPTEGRILIRGRDLHRMSDEELARIRGLEIGF
VFQTFNLVPRLTAIENVLLPTFANSRSNDPQKRAKELLQLMGLQDRMHHRPGELSGGQSQRVSIARALINNPSILLADEP
TGNLDSKTGSEILQIFMDLNNEGRTVVIVTHDPEIAKYADRVVLVKDGEIKYN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-32 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 43
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-26 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-26 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MA3957 NP_618828.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-52 55
MA3957 NP_618828.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-42 52
MA3957 NP_618828.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-42 47
MA3957 NP_618828.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-35 45
MA3957 NP_618828.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 7e-41 44