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Name : istB (MA2079) Accession : NP_617000.1 Strain : Methanosarcina acetivorans C2A Genome accession: NC_003552 Putative virulence/resistance : Unknown Product : IstB helper protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1484 EC number : - Position : 2574030 - 2574803 bp Length : 774 bp Strand : - Note : - DNA sequence : ATGAACAATTTCAGCTATGAGAGACTTCACAGTAACCTGCAATACCTCAAACTGAATACTATTGAAGAGGTTCTGGACAA CTATCTTGAAATTGCTGCAAGAGATAGCAAGACAACAATGGAAGTACTTGATTATCTGTTTGAACAGGAAAAGAAGCACA GAGAAGCTGCTGCAATTGAGAGAAGGATGAAAAGTGCAGCATTTCCTGTGAAAAAGACGCTTGATGAATTCGATTTTGAG TTTCAGTCATCTATTGATAAAAAAGTCATAGAAGACCTTGCAACGTTGAGATTTGTTCATAACGTAGAAAACGTTGTTTT CCTTGGTCCTCCCGGAGTTGGAAAGTCTCATCTTGCAATCGCTCTTGGGATTGAAGTAGCAAAAGCAGGGATTTCGGTTT ACTTTACCAATACAGGAAACCTTATCGAGAAGTTGAAAATAGCAAATCGAGAAGGAATGCTTGAAAAGAAACTCAAAGGC TTTATGAAATTTAAAGTTCTGATCATTGATGAAATGGGTTATCTCCCATTTGATGAGGAAGGAGCTCACTGTTTATTTCA GTTGATTTCCAGACGTTATGAAAAGAGTTCGACCATCTTTACGTCAAATAAATCATATGGAGAATGGGGAGAGATATTCA AAGACCAGGTAATAGCGGCTGCTGTACTTGATAGAATTCTCCATCACTGTACTACAATTAACATCAGAGGAGAAAGTTAC AGGCTGAAAGAAAGGAAGAAACATGGTATAAAATCAGGAAATATCTACCAGTAA Protein sequence : MNNFSYERLHSNLQYLKLNTIEEVLDNYLEIAARDSKTTMEVLDYLFEQEKKHREAAAIERRMKSAAFPVKKTLDEFDFE FQSSIDKKVIEDLATLRFVHNVENVVFLGPPGVGKSHLAIALGIEVAKAGISVYFTNTGNLIEKLKIANREGMLEKKLKG FMKFKVLIIDEMGYLPFDEEGAHCLFQLISRRYEKSSTIFTSNKSYGEWGEIFKDQVIAAAVLDRILHHCTTINIRGESY RLKERKKHGIKSGNIYQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec58 | AAW51741.1 | Aec58 | Not tested | AGI-3 | Protein | 2e-46 | 47 |
| y1093 | CAD42087.1 | OrfB protein of IS100 transposase | Not tested | PAI II 536 | Protein | 1e-46 | 42 |
| YPTB1586 | YP_070114.1 | transposase/IS protein | Not tested | HPI | Protein | 2e-46 | 42 |
| orfB | CAE85183.1 | OrfB protein, transposase, IS100 | Not tested | PAI V 536 | Protein | 1e-46 | 42 |
| unnamed | CAA21402.1 | - | Not tested | HPI | Protein | 2e-46 | 42 |
| api84 | CAF28558.1 | putative transposase | Not tested | YAPI | Protein | 1e-46 | 42 |
| y1093 | CAC43411.1 | IS100 transposase; transposase ORFA | Not tested | PAI III 536 | Protein | 1e-46 | 42 |
| y1093 | CAD66188.1 | transposase Orf B, insertion element IS100 | Not tested | PAI III 536 | Protein | 2e-46 | 42 |
| unnamed | CAB46598.1 | IS100 transposase | Not tested | HPI | Protein | 1e-46 | 42 |
| s0036 | CAD33774.1 | ORF B protein | Not tested | PAI I 536 | Protein | 1e-46 | 42 |
| YPO1901 | YP_002346891.1 | transposase/IS protein | Not tested | HPI | Protein | 1e-46 | 42 |
| y2410 | NP_669717.1 | transposase/IS protein | Not tested | HPI | Protein | 1e-46 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| istB | NP_617000.1 | IstB helper protein | VFG1627 | Protein | 7e-47 | 42 |
| istB | NP_617000.1 | IstB helper protein | VFG1606 | Protein | 7e-47 | 42 |
| istB | NP_617000.1 | IstB helper protein | VFG1663 | Protein | 9e-47 | 42 |
| istB | NP_617000.1 | IstB helper protein | VFG1515 | Protein | 7e-47 | 42 |
