Gene Information

Name : covR (spyM18_0328)
Accession : NP_606584.1
Strain : Streptococcus pyogenes MGAS8232
Genome accession: NC_003485
Putative virulence/resistance : Virulence
Product : CovR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 284124 - 284810 bp
Length : 687 bp
Strand : +
Note : best blastp match gb|AAC64935.1| (AF082668) CsrR [Streptococcus pyogenes]

DNA sequence :
ATGACAAAGAAAATTTTAATTATTGAAGATGAAAAGAATCTGGCTAGATTCGTTTCTCTTGAGCTGCAACATGAGGGTTA
TGAAGTCATTGTTGAGGTCAATGGTCGTGAAGGGTTAGAAACTGCTTTGGAAAAAGAGTTTGATTTAATCCTGCTTGACT
TAATGTTACCAGAGATGGATGGTTTTGAAGTGACCCGTCGTTTGCAAACCGAAAAAACAACGTATATCATGATGATGACT
GCGCGTGATTCTATTATGGATGTGGTTGCAGGTTTAGACCGCGGTGCAGACGACTATATTGTTAAACCGTTTGCCATTGA
AGAACTACTTGCCCGTATTCGTGCTACTTTCCGCCGTCAAGATATTGAATCTGAGAAGAAAGTGCCTAGTCAAGGCATTT
ATCGAGATCTAGTTTTAAATCCACAAAACCGTTCAGTTAATCGTGGCGACGATGAGATTCCTCTCACTAAACGTGAATAT
GATTTGCTTAATATTTTGATGACTAACATGAATCGTGTCATGACACGTGAAGAATTATTGTCAAATGTTTGGAAATATGA
TGAAGCCGTTGAGACTAATGTTGTAGATGTCTATATTCGTTATCTCCGCGGCAAAATTGACATTCCAGGCAAGGAATCTT
ATATCCAAACAGTGCGTGGCATGGGATACGTTATTCGTGAGAAATAA

Protein sequence :
MTKKILIIEDEKNLARFVSLELQHEGYEVIVEVNGREGLETALEKEFDLILLDLMLPEMDGFEVTRRLQTEKTTYIMMMT
ARDSIMDVVAGLDRGADDYIVKPFAIEELLARIRATFRRQDIESEKKVPSQGIYRDLVLNPQNRSVNRGDDEIPLTKREY
DLLNILMTNMNRVMTREELLSNVWKYDEAVETNVVDVYIRYLRGKIDIPGKESYIQTVRGMGYVIREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-37 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-36 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
covR NP_606584.1 CovR HE999704.1.gene1528. Protein 8e-59 62
covR NP_606584.1 CovR AE015929.1.gene1106. Protein 7e-49 54
covR NP_606584.1 CovR NC_010079.5776364.p0 Protein 1e-50 53
covR NP_606584.1 CovR NC_002952.2859858.p0 Protein 1e-50 53
covR NP_606584.1 CovR NC_007622.3794948.p0 Protein 1e-50 53
covR NP_606584.1 CovR NC_003923.1003417.p0 Protein 1e-50 53
covR NP_606584.1 CovR NC_013450.8614146.p0 Protein 1e-50 53
covR NP_606584.1 CovR NC_002951.3238224.p0 Protein 1e-50 53
covR NP_606584.1 CovR NC_007793.3914065.p0 Protein 1e-50 53
covR NP_606584.1 CovR NC_002758.1121390.p0 Protein 1e-50 53
covR NP_606584.1 CovR NC_012469.1.7685629. Protein 1e-37 43
covR NP_606584.1 CovR HE999704.1.gene2815. Protein 1e-38 42
covR NP_606584.1 CovR BAC0125 Protein 7e-36 41
covR NP_606584.1 CovR AE016830.1.gene1681. Protein 1e-38 41
covR NP_606584.1 CovR BAC0197 Protein 5e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
covR NP_606584.1 CovR VFG1390 Protein 1e-40 43
covR NP_606584.1 CovR VFG0596 Protein 3e-37 43
covR NP_606584.1 CovR VFG1702 Protein 5e-33 41