|
Name : FN0110 (FN0110) Accession : NP_603020.2 Strain : Fusobacterium nucleatum ATCC 25586 Genome accession: NC_003454 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 744883 - 746148 bp Length : 1266 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTAGAATTAAAATTTATGCGTGAAAATGTTGAAATGCTTAAAGAAATGCTAAAAAACAGAAATAGCAATGTTGATAT GGATGCTTTTGTTGAATTAGATTCAAAGAGAAGAGAAGTTTTATCCGAAGTAGAAAATTTAAAAAGAGAAAGAAATAATG CTTCTGCAGAAATTGCAAATTTAAAGAAAGAAAAGAAAAATGCTGACCATATAATAGAAAAAATGGGAGAAGTTTCTACA AAAATAAAAGATTTAGATGCTGAACTTGTTGAAATAGATGAAAAAATTAAAGATATTCAATTAAATATACCTAATGTATA TCATCCATCAACTCCTATTGGTCCTGATGAAGATTATAACCTTGAAATCAGAAAATGGGGAATACCTAAGAAATTTGATT TTGAACCAAAATCACACTGGGATATTGGAGAAGATTTAGGAATATTAGATTTTGAAAGAGGAGCAAAATTAAGTGGTTCA AGATTTGTTCTATATAGAGGAGCAGCTGCAAGATTAGAAAGAGCTATAATTAACTTTATGCTTGATGTTCATACTTTGGA AGAAGGTTACACAGAACATATAACTCCATTTATGGTTAAAGCAGAAGTTTGTGAAGGAACAGGGCAACTTCCAAAATTTG AAGAAGATATGTATAAAACAACTGATGATATGTACTTAATTTCTACTTCTGAAATTACTATGACAAATATCCATAGAAAA GAAATTTTAGAACAAGCTGAATTACCTAAATATTACACTGCTTATTCTCCTTGTTTCAGAAGAGAAGCAGGTTCTTATGG AAAAGATGTCAAAGGTTTAATAAGATTACACCAATTTAATAAGGTAGAAATGGTTAAAATAACAGATGCTGAATCTTCTT ATGATGAACTTGAAAAAATGGTAAACAATGCTGAAACAATCTTACAAAGATTAGAATTACCTTATCGTGTAATTCAACTT TGTTCTGGAGATTTAGGTTTTAGTGCTGCTAAAACTTATGACTTAGAAGTTTGGTTACCATCTCAAAATAAATATAGAGA AATTTCTTCTTGTTCAAACTGTGAAGCATTTCAAGCTAGAAGAATGGGATTAAAATATAGAGTTCCTAATGGAAGTGAAT TCTGTCATACTTTAAATGGTTCAGGACTTGCAGTAGGTAGAACATTGGTTGCTATTATGGAAAATTATCAACAAGAAGAT GGTTCTTTCTTAGTTCCTAAGGTATTAATTCCTTATATGGGTGGAGTAGATGTTATTAAAAAGTAG Protein sequence : MLELKFMRENVEMLKEMLKNRNSNVDMDAFVELDSKRREVLSEVENLKRERNNASAEIANLKKEKKNADHIIEKMGEVST KIKDLDAELVEIDEKIKDIQLNIPNVYHPSTPIGPDEDYNLEIRKWGIPKKFDFEPKSHWDIGEDLGILDFERGAKLSGS RFVLYRGAAARLERAIINFMLDVHTLEEGYTEHITPFMVKAEVCEGTGQLPKFEEDMYKTTDDMYLISTSEITMTNIHRK EILEQAELPKYYTAYSPCFRREAGSYGKDVKGLIRLHQFNKVEMVKITDAESSYDELEKMVNNAETILQRLELPYRVIQL CSGDLGFSAAKTYDLEVWLPSQNKYREISSCSNCEAFQARRMGLKYRVPNGSEFCHTLNGSGLAVGRTLVAIMENYQQED GSFLVPKVLIPYMGGVDVIKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-118 | 58 |
