Gene Information

Name : Cgl0856 (NCgl0822)
Accession : NP_600085.1
Strain : Corynebacterium glutamicum ATCC 13032
Genome accession: NC_003450
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 915696 - 916364 bp
Length : 669 bp
Strand : -
Note : involved in lipoprotein release

DNA sequence : 
ATGACAAACACGCCTTTCCCCCTTGAACTTCAAAACATCTCCTGCGCCTTCGGAGAAGGCCCACGCCACGTCTCCGCGCT
CAACAACGTCTCGCTGGCAGTCAATCCCGGCGAACTCGTTGCCATCATGGGCCCGTCCGGCTCAGGAAAATCCACCTTGC
TCAACGTCGCCGGCCTCCTGCAGCGCGCAACCTCTGGCCATGTGCTTATCGACGGTGCCAGCGCCTCAGACCTCAACGCC
AAACGCGCAGCTGAAACCAGGCGTCGCCACATCGGAGTTATTTTCCAAAACTACAACCTGGTCCCCACCCTCACCGTCGG
AGAAAACGTCGGTCTGCCCCTAGAACTCGACGGCAAAACCGACCGCCAGGCAGTAGCAATCGCACTCGCGGAAGTCGGCC
TCGAAGGCTTCGACGACCGCTTCCCCGAAGAGATCTCCGGCGGCCAAGCCCAGCGCGTCGCCATCGCGAGAGCCCTCATC
GGCCCCCGAAAAATCTTGCTTGCCGACGAACCCACCGGCGCCCTCGACACCTCCACCGGCGACGCAGTCCTCCGCGTCCT
CCGCCAAAGAATCGATTCCGGTGCCGCAGGCCTCCTTGTCACCCACGAACCCCGCTTCGCCGCGTGGGCAGACCGAACAA
TCATGCTTAGGGATGGTGAAATCCAGTGA

Protein sequence : 
MTNTPFPLELQNISCAFGEGPRHVSALNNVSLAVNPGELVAIMGPSGSGKSTLLNVAGLLQRATSGHVLIDGASASDLNA
KRAAETRRRHIGVIFQNYNLVPTLTVGENVGLPLELDGKTDRQAVAIALAEVGLEGFDDRFPEEISGGQAQRVAIARALI
GPRKILLADEPTGALDTSTGDAVLRVLRQRIDSGAAGLLVTHEPRFAAWADRTIMLRDGEIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-38 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 45
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 7e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cgl0856 NP_600085.1 ABC transporter ATPase NC_008702.1.4606598. Protein 3e-36 49
Cgl0856 NP_600085.1 ABC transporter ATPase NC_012469.1.7686878. Protein 1e-38 46
Cgl0856 NP_600085.1 ABC transporter ATPase CP001581.1.gene598.p Protein 2e-33 44
Cgl0856 NP_600085.1 ABC transporter ATPase CP001581.1.gene798.p Protein 6e-33 43
Cgl0856 NP_600085.1 ABC transporter ATPase NC_012469.1.7685735. Protein 5e-31 42
Cgl0856 NP_600085.1 ABC transporter ATPase NC_012469.1.7686946. Protein 3e-22 41