Gene Information

Name : Cgl0038 (NCgl0037)
Accession : NP_599290.1
Strain : Corynebacterium glutamicum ATCC 13032
Genome accession: NC_003450
Putative virulence/resistance : Virulence
Product : ABC transporter ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 38202 - 38981 bp
Length : 780 bp
Strand : +
Note : similar to ABC-type cobalamin/Fe3+-siderophores transport systems, ATPases; yype II (general) secretory pathway (IISP) family protein

DNA sequence : 
ATGCTGCAAGCGCATGATCTCACGCTGAGTTACGGCGGGCGAAATATTGTAGAAGGGCTCAGTCTGGACCTTCCGGAAAG
AGGCCTCAGCATCATCATTGGCCCCAACGGATGCGGGAAATCAACCGTTTTGAAAGCGTTGGGCAGACTGCTGAAACCAC
AATTGGGGAAGATCACGCTAGGTGGGCGAGATATTTCCAGCATGGGCACCAAGCATGTGGCGAAACACATCGGGGTGCTT
CCGCAACCCCCATATGCGCCCGATGGGGTGAGCGTCACGGAGCTGGTCAGCCGCGGGCGGTATCCGCACCAACATCTGCT
GTCGCAATGGTCAAAAGACGATGAAGCCATTGTGGCGCGCTCGCTGGCGGAAGTCGGCATGCACACCCATGCTGAGCATT
TAGTGTCGGAACTTTCAGGCGGCCAGCGCCAACGGGCGTGGATCGCCATGGCGCTCGCTCAGGAAACAGACATTTTGCTT
CTCGACGAGCCCACCACGTTCCTCGACGTAGCCCACCAAATATCCGTCCTCGATTTATGCTCCGACCTGCACCAACGTGG
TCGCACCCTGGCCATTGTTCTACACGATCTGAACATGGCTGCACGGTATGCCACCCACATCATCGCCATGCGGGACGGCA
CCATCATCGACCAAGGAAAACCCGAAGAAATACTCACTAAAGCGCTGCTCAAAGAAGTTTTTGACCTCGACGCACTCATC
CTCAAAGACCCCAACAACGGCCGACCACTCATCGTGCCCACAGACAGGAGAAACTCATGA

Protein sequence : 
MLQAHDLTLSYGGRNIVEGLSLDLPERGLSIIIGPNGCGKSTVLKALGRLLKPQLGKITLGGRDISSMGTKHVAKHIGVL
PQPPYAPDGVSVTELVSRGRYPHQHLLSQWSKDDEAIVARSLAEVGMHTHAEHLVSELSGGQRQRAWIAMALAQETDILL
LDEPTTFLDVAHQISVLDLCSDLHQRGRTLAIVLHDLNMAARYATHIIAMRDGTIIDQGKPEEILTKALLKEVFDLDALI
LKDPNNGRPLIVPTDRRNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 7e-63 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 7e-63 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-57 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-53 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-53 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-53 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-53 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-53 44
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-51 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-54 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-54 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-54 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-54 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cgl0038 NP_599290.1 ABC transporter ATPase BAC0164 Protein 1e-51 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cgl0038 NP_599290.1 ABC transporter ATPase VFG0925 Protein 3e-65 51
Cgl0038 NP_599290.1 ABC transporter ATPase VFG1042 Protein 1e-51 43