|
Name : Cgl2893 (NCgl2793) Accession : NP_602083.2 Strain : Corynebacterium glutamicum ATCC 13032 Genome accession: NC_003450 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 3094076 - 3095344 bp Length : 1269 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATCGATCTGAAATTCCTCCGTGATAACCCGGACGTTGTTCGTGCCTCCCAGATCACTCGCGGCGAAGACCCCGCGCT TGTGGACGAACTGATTAGTGCTGATGAATCTCGTCGCGAAGCAATCAAGGCTGCCGACGATTTGCGCGCTGAGCAGAAGG CTTTTGGAAAGAAGATCGGACAGGCCTCTCCGGAGGACCGCCCTGCACTTCTGGAGGGTTCCAACGAACTCAAAGCCAAG GTGAAGGATGCTGAGGCTGCACAGGAAGCTGCTGAGGCGAAAGTCAATGAGCTGCAGATGAAGCTCTCCAACGTGGTTTC CGGCGCGCCTGCTGGTGGCGAAGATGATTTCGTCGTCCTGGAGACCATCGGCGAGCCTCGCACTTTTGATTTCGAGCCAA AGGATCACCTGGAGCTCGGTGAATCCCTCGGACTTATCGATATGAAGCGCGGCACCAAGGTTTCCGGTGCACGTTTCTAC TACCTCACCGGTGACGGCGCAATGCTGCAGTTGGGCATGCTCATGTTGGCTGCTCAGAAGGCGCGCGAAGCTGGATTTAG CATGATGATCCCTCCAGTTTTGGTGCGCCCTGAAATCATGGCGGGCACTGGATTCTTGGGTGATCACTCCGAGGAGATCT ACTACCTCGAACGCGATGACATGTACTTGGTGGGTACCTCTGAGGTGGCTCTTGCGGGTTACCACAAGGACGAAATCATT GATCTCAACGAAGGCCCAGTGAAGTACGCCGGTTGGAGCTCCTGCTTCCGCCGTGAGGCTGGTTCCTACGGCAAGGACAC CCGAGGCATTTTGCGTGTGCACCAGTTCGACAAGGTTGAGATGTTTGTCTACTGCAAGCCTGAAGATGCTGAAGATGTAC ACCAGCAGCTGCTCGGCATGGAAAAGGAAATGCTCGCAGCCATCGAGGTTCCTTACCGCGTCATCGACGTTGCCGGTGGA GACTTGGGTGCATCTGCTGCCCGCAAGTTCGACACCGAGGCATGGGTGCCAACCCAGGACACCTACCGTGAACTCACCTC GACCTCTAACTGCACCACTTTCCAGGCTCGTCGCCTGCAGACTCGTTACCGCGATGAAAACGGCAAGCCACAGATCGCCG CAACCCTGAACGGTACGTTGGCTACCACTCGTTGGCTTGTCGCGATCCTGGAGAACAACCAGCAGGCCGATGGCTCTGTT GTTGTTCCTGAGGCGCTTCGTCCATTCGTGGGCAAAGACGTGCTCAAGCCAGTGAAACAAGCCGGTTAA Protein sequence : MIDLKFLRDNPDVVRASQITRGEDPALVDELISADESRREAIKAADDLRAEQKAFGKKIGQASPEDRPALLEGSNELKAK VKDAEAAQEAAEAKVNELQMKLSNVVSGAPAGGEDDFVVLETIGEPRTFDFEPKDHLELGESLGLIDMKRGTKVSGARFY YLTGDGAMLQLGMLMLAAQKAREAGFSMMIPPVLVRPEIMAGTGFLGDHSEEIYYLERDDMYLVGTSEVALAGYHKDEII DLNEGPVKYAGWSSCFRREAGSYGKDTRGILRVHQFDKVEMFVYCKPEDAEDVHQQLLGMEKEMLAAIEVPYRVIDVAGG DLGASAARKFDTEAWVPTQDTYRELTSTSNCTTFQARRLQTRYRDENGKPQIAATLNGTLATTRWLVAILENNQQADGSV VVPEALRPFVGKDVLKPVKQAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-61 | 41 |
