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Name : Cgl0254 (NCgl0250) Accession : NP_599507.1 Strain : Corynebacterium glutamicum ATCC 13032 Genome accession: NC_003450 Putative virulence/resistance : Unknown Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 273539 - 274120 bp Length : 582 bp Strand : - Note : Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : GTGAAGTCAAAAGAGCGTAACGACGCCCACGTCACCGAGCTGGCCCTAGCCGCCGGCCGTGGCGACCGCGCAGCTCTCAC CGATTTCATCCGGGAAACCCAAGACGATGTCTGGCGTCTCCTCGCCCACCTTGGCGGCCACGAAATCGCCGACGATCTAA CCCAAGAAACTTATCTGCGGGTCATGAGCGCCCTCCCCCGCTTCGCAGCGCGCTCCTCGGCGCGCACCTGGCTACTATCG CTAGCCCGGCGCGTCTGGGTCGACAACATCCGACACGACATGGCACGCCCCCGCAAATCCATCGTCGAATACGAAGACAC CGGTGCCACCGACGCGAGCAACGCAGGCATCTGGTCCGAGTGGATCGACGTGCGCACGCTTATCGACGCCCTCCCACCCG AACGCCGCGAAGCCCTCATCCTCACCCAAGTGTTGGGCTACACCTACGAAGAAGCCGCAAAAATCGCCGACGTCCGAGTC GGAACAATCCGTTCCCGCGTAGCCCGCGCCAGAGCGGACCTCATTGCTGCAACAGCTACCGGTGATTCCTCAGCCGAAGA TGGCAAATCCGCCCAAGGTTAG Protein sequence : MKSKERNDAHVTELALAAGRGDRAALTDFIRETQDDVWRLLAHLGGHEIADDLTQETYLRVMSALPRFAARSSARTWLLS LARRVWVDNIRHDMARPRKSIVEYEDTGATDASNAGIWSEWIDVRTLIDALPPERREALILTQVLGYTYEEAAKIADVRV GTIRSRVARARADLIAATATGDSSAEDGKSAQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sigC | YP_005126716.1 | ECF-family sigma factor C | Not tested | Not named | Protein | 1e-52 | 80 |
