Gene Information

Name : Cgl1626 (NCgl1564)
Accession : NP_600840.1
Strain : Corynebacterium glutamicum ATCC 13032
Genome accession: NC_003450
Putative virulence/resistance : Virulence
Product : ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1721780 - 1722856 bp
Length : 1077 bp
Strand : +
Note : similar to ABC-type cobalamin/Fe3+-siderophores transport systems

DNA sequence :
ATGCTTCTTTCCGCCCGCACACACACGAGTTTCCAAGAACTTGGACTCAATGCTAGTCGGCGCAAAGCAATCAACTGGAC
ACTGGCACTCACTGTGGTGCTAATTGCCTCCATGTTTGTTGGCGTGCTCATCGGTGCATCCGGGACCTCAGTGTTTTCCA
CGTGGACCGTAATTAGCCACCATCTTTTTGGCACTGAGCTAGGTGGCTCCGACACTGCCGACGCCATCATTTGGTACATC
CGCACCCCACGCGTCTTGCTCGCTGCCATTGTGGGCGCAGGCCTTGCCCTGGCAGGTGCCATCATGCAAGTACTGGTCCG
AAACATGCTGGCAGACCCCTATATCCTCGGGGTGAACTCAGGTGCCAGTTGCGGTGCGGCCGCTGCCTTACTGTTCGGAG
TGGGCGCTGGATTTGGCGATTACGCCCTCCAAGGCAGCGCGTTTCTCGGCGCAATGGCAGCTTCCGGATTGATCTTCTTC
GTGGCGCGCGCAGCGGGGCGCATCTCCTCGACCCGCTTGTTGATGTCCGGCGTAGCGATCGGATACATGCTCTCTGCGGC
AACAAGCTTTCTCATCTTCTCCTCCGACTCCGCCGAAGGCAGCCGCTCCGTGTTGTTCTGGCTGCTTGGATCCTTAGGAC
TTGCCGCATGGAATGGGCCGATGGCGATCATCTTCCTCATCGTGGGCATTGCCCTGGCGTTGCTCATGGTGTTGGGTCCG
CAATTGGATGCCTTAAACTCCGGCGATGAAACCGCACTTACCTTGGGAGTATCCCCTGATCGCCTCCGCATTCTCCTCCT
GGTGATCACCTGCCTGCTGGTGGGATCCATGGTTGCCATGGCCGGCAGCATCGGATTCATCGGCCTTGTCATCCCCCACC
TGGCCAGGCGTTTTGTTAGTGGAAAACACCGACTCATGCTGCCTGTATCCGCGTTGATGGGCGCAATTTTGCTCATCTGG
GCTGATATCGCCGCCCGCACCCTGCTTGCGCCCCAAGAGATTCCCATCGGCATCATCACCGCACTCATCGGAGCACCCTT
CCTCCTGATTCTGGTTCGCCGGATGCACACCTACTGA

Protein sequence :
MLLSARTHTSFQELGLNASRRKAINWTLALTVVLIASMFVGVLIGASGTSVFSTWTVISHHLFGTELGGSDTADAIIWYI
RTPRVLLAAIVGAGLALAGAIMQVLVRNMLADPYILGVNSGASCGAAAALLFGVGAGFGDYALQGSAFLGAMAASGLIFF
VARAAGRISSTRLLMSGVAIGYMLSAATSFLIFSSDSAEGSRSVLFWLLGSLGLAAWNGPMAIIFLIVGIALALLMVLGP
QLDALNSGDETALTLGVSPDRLRILLLVITCLLVGSMVAMAGSIGFIGLVIPHLARRFVSGKHRLMLPVSALMGAILLIW
ADIAARTLLAPQEIPIGIITALIGAPFLLILVRRMHTY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 5e-23 41
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 5e-23 41
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 5e-23 41
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 4e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cgl1626 NP_600840.1 ABC transporter permease VFG0922 Protein 1e-21 41