Gene Information

Name : PF1529 (PF1529)
Accession : NP_579258.1
Strain : Pyrococcus furiosus DSM 3638
Genome accession: NC_003413
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1425928 - 1426935 bp
Length : 1008 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGGATAAGATGAAAATAATTATGGAGAAGGGAACTGAAAGGCTCAAGAGAGGATTTGCAAAGATGGTAAAGGGCGGAGT
CATTATGGACGTTACGAATGCTGAACAGGCTAGAATTGCAGAGGAAGCTGGTGCTGTAGCAGTAATGGCTCTTCACAAGG
TCCCCGCTGATATTAGAAAGGCTGGTGGAGTTGCTAGAATGGCGCCAGTGGAGAAGATTCAGGAGATAATGGATGCCGTT
ACAATTCCAGTAATGGCAAAGGTTAGAATTGGCCATGAAGCTGAGGCAAGAATTCTTGAGGCCTTAGGGGTTGATATGAT
CGATGAAAGTGAAGTTCTAACTCCAGCAGATCCATTCTTCCACATATATAAGAAGAAGTTCACAGTTCCATTCGTTTGTG
GTGCAAGGAACTTAGGAGAGGCCGTGAGGAGGATATGGGAAGGAGCCGCAATGATTAGAACAAAGGGAGAAGCAGGAACT
GGAAACATTATTGAGGCCGTGAGGCATGTGAGGCTAGTTAATGAAAACATAAGATTAATTCAGAGAATGACTGATGAGGA
AATATATGGTGTTGCAGAGAAGTTTGCAGAACCATACTTAAGGTTGGCATTCAGCGTTAAGGAAATAAGCGGTTTACCAA
AGAGAGTCCTCGAAAATGAGCCCATCTATGAGGGCTTTACATACAGGGAAATCGTTGATGGTCTCTACAAGATTCTCTTA
GAGATAAAGAAGCTTGGAAGGTTGCCAGTAGTGAACTTTGCTGCAGGTGGAGTTGCCACACCAGCTGATGCAGCTCTAAT
GATGGCAATGGGTATGGACGGTGTGTTCGTAGGTTCTGGAATCTTCAAGAGCTCAAACCCACCAGCAATGGCAAGGGCAA
TAGTTGAGGCAGTGAACCACTGGGATGAGCCTGATGTTCTTGCCGAGATAAGCAGGGAAATTGGTGAACCAATGCGTGGG
CAAGATATAGCGGAGTTAGAAGTTAGAATGGAAGAGAGGGGAGTTTGA

Protein sequence :
MDKMKIIMEKGTERLKRGFAKMVKGGVIMDVTNAEQARIAEEAGAVAVMALHKVPADIRKAGGVARMAPVEKIQEIMDAV
TIPVMAKVRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFTVPFVCGARNLGEAVRRIWEGAAMIRTKGEAGT
GNIIEAVRHVRLVNENIRLIQRMTDEEIYGVAEKFAEPYLRLAFSVKEISGLPKRVLENEPIYEGFTYREIVDGLYKILL
EIKKLGRLPVVNFAAGGVATPADAALMMAMGMDGVFVGSGIFKSSNPPAMARAIVEAVNHWDEPDVLAEISREIGEPMRG
QDIAELEVRMEERGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-58 54
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 7e-58 54
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-58 54