Gene Information

Name : insB (HCM1.04c)
Accession : NP_569236.1
Strain :
Genome accession: NC_003384
Putative virulence/resistance : Unknown
Product : IS1 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1662
EC number : -
Position : 1876 - 2346 bp
Length : 471 bp
Strand : -
Note : similar to (EMBL:D10483) insB from Escherichia coli insertion element IS1

DNA sequence :
ATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCATTTAAAAAACTCAGGCCGCAGTCGGT
AACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACA
GGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACGATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCA
CCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAG
CAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGT
CGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA

Protein sequence :
MPGNRPHYGRWPQHDFTSFKKLRPQSVTSRIQPGSDVIVCAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLS
PFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 2e-68 93
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 2e-68 93
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 2e-68 93
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 5e-66 92
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 6e-48 92
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 8e-67 89
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 8e-63 85
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 8e-63 85
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 3e-62 84
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 4e-62 84
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 2e-60 83
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 2e-47 81

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insB NP_569236.1 IS1 transposase VFG0612 Protein 6e-61 83