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Name : merD (HCM1.230c) Accession : NP_569420.1 Strain : Genome accession: NC_003384 Putative virulence/resistance : Resistance Product : transcriptional regulator MerD Function : - COG functional category : K : Transcription COG ID : COG0789 EC number : - Position : 171595 - 171957 bp Length : 363 bp Strand : - Note : similar to (EMBL:L29404) merD from Shigella flexneri plasmid IncFII NR1; similar to HCM1.159 DNA sequence : ATGAGCGCCTACACGGTATCGCAACTGGCCCATAACGCTGGGGTGAGCGTACATATCGTGCGCGACTACCTGGTGCGCGG CTTGTTACGGCCGGTGGCCTGCACCACGGGCGGCTACGGCGTGTTCGACGATGCGGCCTTGCAACGGCTGTGCTTCGTGC GCGCGGCCTTCGAGGCGGGTATCGGCCTGGATGCCCTGGCGCGGCTGTGCCGTGCGCTCGACGCAGCGGACGGCGCACAA GCCGCAGCGCAGCTTGCCGTGCTGCGCCAGTTGGTCGAGCGGCGGCGCGCGGCGTTGGCCCATCTGGACGCGCAACTGGC CTCCATGCCAGCCGAGCGGGCGCACGAGGAGGCATTGCCGTGA Protein sequence : MSAYTVSQLAHNAGVSVHIVRDYLVRGLLRPVACTTGGYGVFDDAALQRLCFVRAAFEAGIGLDALARLCRALDAADGAQ AAAQLAVLRQLVERRRAALAHLDAQLASMPAERAHEEALP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| merD | AET25396.1 | MerD | Not tested | PAGI-2(C) | Protein | 8e-32 | 100 |
| merD | AFG30119.1 | MerD | Not tested | PAGI-2 | Protein | 8e-32 | 100 |
| merD | YP_006098386.1 | MerR family transcriptional regulator | Not tested | Tn2411 | Protein | 1e-31 | 100 |
| merD | ACF06181.1 | mercuric resistance protein | Not tested | Tn5036-like | Protein | 8e-32 | 100 |
| merD | ACN81004.1 | MerD | Not tested | AbaR5 | Protein | 5e-24 | 83 |
| merD | CAJ77059.1 | Mercury operon coregulator protein | Not tested | AbaR1 | Protein | 6e-24 | 83 |
| merD | AGK07020.1 | MerD | Not tested | SGI1 | Protein | 2e-25 | 82 |
| merD | AGK07078.1 | MerD | Not tested | SGI1 | Protein | 2e-25 | 82 |
| merD | ABQ57370.1 | MerD | Not tested | SGI1 | Protein | 4e-25 | 81 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| merD | NP_569420.1 | transcriptional regulator MerD | BAC0666 | Protein | 8e-26 | 83 |
| merD | NP_569420.1 | transcriptional regulator MerD | BAC0668 | Protein | 9e-26 | 82 |
| merD | NP_569420.1 | transcriptional regulator MerD | BAC0665 | Protein | 3e-26 | 82 |
| merD | NP_569420.1 | transcriptional regulator MerD | BAC0667 | Protein | 1e-26 | 81 |
| merD | NP_569420.1 | transcriptional regulator MerD | BAC0227 | Protein | 2e-25 | 81 |
| merD | NP_569420.1 | transcriptional regulator MerD | BAC0669 | Protein | 1e-25 | 76 |
