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Name : tnpA (HCM1.169) Accession : NP_569374.1 Strain : Genome accession: NC_003384 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4644 EC number : - Position : 122925 - 125897 bp Length : 2973 bp Strand : + Note : similar to (EMBL:X14236) tnpA from Escherichia coli transposase for transposon Tn3926 DNA sequence : ATGCCACGCCGCTCAATCCTGTCCGCCACCGAGCGCGAAAGCCTGCTGGCACTGCCAGATGCCAAAGACGAACTGATACG GCACTACACGTTCAACGAAACCGACCTGTCGGTGATCCGTCAGCGTCGCGGCGCCGCGAATCGATTGGGCTTCGCTGTGC AGCTTTGCTACTTGCGATTCCCTGGCACCTTTTTGGGCGTCGATGAGCCTCCGTTTCCGCCCCTGTTGCGCATGGTGGCC GCGCAACTCAAGATGCCAGTGGAAAGTTGGAGCGAGTACGGCCAGCGCGAACAGACACGGCGGGAGCACTTGGTCGAGCT GCAAACGGTTTTTGGGTTCAAGCCCTTCACCATGAGCCACTATCGGCAAGCCGTGCATACATTGACCGAGCTGGCCTTGC AGACCGACAAAGGCATCGTGCTGGCGAGCGCACTTGTCGAGAATCTGCGGCGGCAGAGCATTATCCTGCCCGCCATGAAT GCCATCGAGCGCGCAAGCGCCGAGGCCATCACCCGTGCCAACCGACGCATTTACGCGGCGCTGACCGATTCTTTGTTATC ACCCCACCGTCAGCGCCTGGACGAACTTCTCAAGCGCAAGGACGGCAGTAAAGTGACGTGGCTGGCATGGCTGCGCCAGT CGCCTGCCAAACCGAACTCTCGCCACATGCTCGAACATATTGAGCGCCTGAAATCCTGGCAAGCACTTGATCTGCCCGCA GGCATCGAGCGGCAGGTTCACCAGAACCGCCTGCTCAAAATCGCTCGTGAAGGTGGCCAGATGACGCCTGCTGATCTGGC AAAGTTCGAGGTGCAACGACGCTATGCCACGCTGGTAGCGCTGGCCATCGAAGGCATGGCCACCGTCACCGATGAAATCA TCGACCTTCACGATCGCATCATCGGCAAGCTGTTCAACGCGGCCAAGAACAAGCATCAGCAGCAGTTCCAGGCTTCCGGC AAGGCGATCAACGACAAGGTGCGGATGTATGGGCGCATCGGTCAAGCGTTGATTGAGGCCAAGCAAAGCGGCAGCGATCC GTTCGCCGCCATCGAGGCCGTTATGCCCTGGGACACCTTCGCCGCCAGCGTCACCGAAGCGCAAACATTGGCGCGGCCTG CCGACTTTGATTTCCTGCACCACATCGGTGAAAGCTATGCCACGCTACGCCGCTACGCGCCGCAGTTCCTGGGCGTGCTC AAATTGCGGGCTGCGCCCGCCGCCAAGGGTGTGCTCGATGCCATCGACATGCTGCGCGGCATGAACAGCGACAGCGCGCG CAAGGTGCCCGCCGATGCGCCAACCGCATTCATCAAGCCGCGCTGGGCAAAGCTGGTTCTGACCGACGACGGCATCGACC GGCGTTACTACGAGTTATGCGCCCTGTCGGAGCTGAAGAACGCGCTGCGCTCCGGTGATGTCTGGGTGCAGGGTTCTCGC CAGTTCAAGGACTTCGACGAATACCTGGTGCCGGTCGAGAAGTTCGCCACTTTGAAGCTGGCCAGCGAATTGCCGCTGGC AGTGGCCACCGACTGCGACCAATACCTGCATGACCGGTTGGAATTGTTGGAGGCGCAACTCGCCACAGTCAACCGCATGG CTGCGGCCAACGACTTACCGGATGCCATCATCACCACCGCGTCAGGCCTGAAGATCACGCCGCTGGACGCGGCAGTACCA GACGCCGCGCAAGCCATGATCGACCAGACAGCTATGCTGCTGCCGCACCTCAAAATCACCGAGTTGCTGATGGAGGTCGA TGAATGGACGGGCTTCACCCGCCACTTCACACACCTGAAGACCAGCGACACGGCCAAGGACAAAACCTTGCTGTTGACGA CGATCCTGGCCGACGCGATCAACCTGGGTCTGACCAAAATGGCCGAGTCCTGCCCTGGCACCACCTACGCCAAGCTGTCT TGGCTGCAAGCCTGGCACATCCGCGATGAAACCTATTCGACGGCGCTGGCCGAGCTGGTGAATGCGCAGTTTCGGCAACC CTTCGCCGGCAACTGGGGTGACGGCACCACGTCATCGTCGGACGGCCAGAACTTCAGAACCGGCAGCAAAGCAGAAAGCA CTGGTCATATCAACCCGAAGTATGGAAGCAGTCCAGGACGGACTTTCTACACCCATATCTCCGACCAGTACGCGCCCTTC AGTGCCAAGGTGGTCAACGTGGGCATTCGTGATTCAACTTACGTGCTTGATGGCCTGCTGTACCACGAGTCGGACTTGCG CATCGAGGAACACTACACCGACACGGCAGGCTTCACCGATCACGTGTTTGGCTTGATGCATTTGCTGGGATTTCGCTTCG CGCCGCGTATCCGTGACTTGGGCGAAACCAAGCTATTCATCCCCAAGGGCGATGCCGCCTATGACGCGCTCAAGCCGATG ATTAGCAGCGACAGGCTGAACATCAAGCAAATACGCGCCCATTGGGATGAAATTCTGCGGCTGGCCACCTCCATCAAGCA AGGCACGGTAACGGCTTCGCTGATGCTGCGCAAACTCGGCAGCTACCCGCGCCAGAACGGCTTGGCCGTGGCGTTGCGCG AGCTGGGGCGCATCGAGCGCACGCTGTTCATTTTGGATTGGCTGCAAAGCGTGGAGCTGCGCCGCCGCGTCCATGCGGGG CTGAATAAGGGCGAGGCGCGCAACGCGCTGGCCAGGGCGGTCTTCTTCTACCGATTGGGTGAAATCCGCGACCGCAGTTT TGAGCAGCAGCGCTACCGGGCCAGCGGCCTCAATCTGGTGACGGCGGCCATCGTGTTGTGGAACACGGTATATCTGGAGC GTGCCACCAGTGCTTTGCGTGGCAACGGCACGGCGCTGGACGACACATTGTTGCAATATCTGTCGCCGCTGGGGTGGGAG CACATCAACCTGACCGGCGATTACCTATGGCGCAGCAGCGCCAAGGTCGGTGCGGGGAAGTTTAGGCCATTGCGACCGCT GCCACCGGCTTAG Protein sequence : MPRRSILSATERESLLALPDAKDELIRHYTFNETDLSVIRQRRGAANRLGFAVQLCYLRFPGTFLGVDEPPFPPLLRMVA AQLKMPVESWSEYGQREQTRREHLVELQTVFGFKPFTMSHYRQAVHTLTELALQTDKGIVLASALVENLRRQSIILPAMN AIERASAEAITRANRRIYAALTDSLLSPHRQRLDELLKRKDGSKVTWLAWLRQSPAKPNSRHMLEHIERLKSWQALDLPA GIERQVHQNRLLKIAREGGQMTPADLAKFEVQRRYATLVALAIEGMATVTDEIIDLHDRIIGKLFNAAKNKHQQQFQASG KAINDKVRMYGRIGQALIEAKQSGSDPFAAIEAVMPWDTFAASVTEAQTLARPADFDFLHHIGESYATLRRYAPQFLGVL KLRAAPAAKGVLDAIDMLRGMNSDSARKVPADAPTAFIKPRWAKLVLTDDGIDRRYYELCALSELKNALRSGDVWVQGSR QFKDFDEYLVPVEKFATLKLASELPLAVATDCDQYLHDRLELLEAQLATVNRMAAANDLPDAIITTASGLKITPLDAAVP DAAQAMIDQTAMLLPHLKITELLMEVDEWTGFTRHFTHLKTSDTAKDKTLLLTTILADAINLGLTKMAESCPGTTYAKLS WLQAWHIRDETYSTALAELVNAQFRQPFAGNWGDGTTSSSDGQNFRTGSKAESTGHINPKYGSSPGRTFYTHISDQYAPF SAKVVNVGIRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFGLMHLLGFRFAPRIRDLGETKLFIPKGDAAYDALKPM ISSDRLNIKQIRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAG LNKGEARNALARAVFFYRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERATSALRGNGTALDDTLLQYLSPLGWE HINLTGDYLWRSSAKVGAGKFRPLRPLPPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | ACF06153.1 | transposase | Not tested | Tn5036-like | Protein | 0.0 | 100 |
| EC042_4089 | YP_006098372.1 | transposase | Not tested | Tn2411 | Protein | 0.0 | 89 |
| tnpA | AAL08440.1 | transposase TnpA | Not tested | SRL | Protein | 0.0 | 87 |
| EXA24 | ABD94633.1 | truncated Tn1721 tranposase | Not tested | ExoU island A | Protein | 0.0 | 73 |
| tnpA | ACY75538.1 | TnpA | Not tested | Tn6060 | Protein | 0.0 | 73 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tnpA | NP_569374.1 | transposase | VFG1031 | Protein | 0.0 | 87 |
