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Name : CPE0949 (CPE0949) Accession : NP_561865.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG1131 EC number : - Position : 1147720 - 1148640 bp Length : 921 bp Strand : + Note : similar to sp:BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BCRA from Bacillus licheniformis (306 aa); 42.4% identity in 302 aa overlap; ATP-binding protein DNA sequence : TTGGGAAATATAATTTCTATAAGAAATTTAAACAAAAATTATGGTAAGAAAAATATTCTTGATAATTTAAGTATGAATCT AAAAAAAGGCGATATATATGGTTTAGTTGGGAAAAATGGTGCTGGTAAAACAACTTTAATAAGAATTATTTTATCCTTAG CTAACTATGACTCAGGAGAAATAGAACTTTTTGGTGAAATTGATGAAAAGAAAAAGCTTTATGAGCATAAGAAAATAGGT AATATAATAGAAACTCCATCATTTTATTCTTTTCTTACAGCAAAGCAAAATCTTGAATATTATAAAATTCAAAGAGGAAT AGTAGGAGAAAAATCTATTGATGAAATCCTAGAAATGGTTGGACTTGGAGATGTGGGAAATAAAAAGTTCAAAAAGTTTT CATTAGGTATGAAGCAAAGATTAGGATTAGCCCTTGCACTTTTAGGAGAACCAGAATTGCTTATTTTAGATGAGCCTACT AATGGAATGGATCCTATGGGAATTAAAGAAGTAAGAGAAGTATTAATTAATTTAAATAAGAAAAATGGAGTTACAATATT AGTATCAAGTCATATTTTAGGAGAGTTATCACAACTTGCAAATTGTTATGGATTTTTAAAGGATGGTAAAATAATAGAAG AGATTTCATCAGAGGAACTTAATGAGAAATGTAGGAATCATTTGCTTATTAAGGTTGACGATTGTAAAAAGGCGGCAGTA ATTTTAGAAAGGGTTTTAGATAATAACTCATATGAAGTTTTACCTGATAGATTTATTAAGATTTATAATAAGTTAGATGA ACCTCAATTAATAAACAGAGCGTTAGTAGAAAATGGAGTTGAAGTTTATTCTTTAGAAAGAATAGGAGTTAACTTAGAAG ATTACTTTGTAGATTTAATTGGAGGTGAATATAATGCTTAA Protein sequence : MGNIISIRNLNKNYGKKNILDNLSMNLKKGDIYGLVGKNGAGKTTLIRIILSLANYDSGEIELFGEIDEKKKLYEHKKIG NIIETPSFYSFLTAKQNLEYYKIQRGIVGEKSIDEILEMVGLGDVGNKKFKKFSLGMKQRLGLALALLGEPELLILDEPT NGMDPMGIKEVREVLINLNKKNGVTILVSSHILGELSQLANCYGFLKDGKIIEEISSEELNEKCRNHLLIKVDDCKKAAV ILERVLDNNSYEVLPDRFIKIYNKLDEPQLINRALVENGVEVYSLERIGVNLEDYFVDLIGGEYNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH2304 | YP_254219.1 | ABC-type multidrug transport system, ATPase | Not tested | ¥ðSh1 | Protein | 1e-27 | 41 |
