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Name : CPE0805 (CPE0805) Accession : NP_561721.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Unknown Product : cyclomaltodextrinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 988114 - 989946 bp Length : 1833 bp Strand : + Note : similar to pir:S63617 cymH protein from Klebsiella oxytoca (598 aa); 54.7% identity in 563 aa overlap DNA sequence : ATGGGTAAAATTACAAGAGAGGCAATACATCATATAGCTCAAAGCAATTATTCTTATGGATATGATAATGAAACTTTGCA TTTAAGAGTTAAGACTAAAAAAGGTGAAGTTAATAAAGTGGAAATAAGAATTGGAGATCCTTACATATGGGATGAAGGTG GTTGTGATGGAGGAAATATGAATGCCACTGGAGGACGATGGACAGGTGGAAAAAGTTATCCTATGAGAAAGGAATGCGAA ACAAAATACTTTGATCACTGGATAGTAGGGTATAAACCATTAACCAAACGTTCAAGATATGGATTTATATTATATGGAGA TGAGGAAACTCTTTTATGCACAGAAAAAAGAATAGAGGAGTTAGATGGAAAGTATGATGAAGAAAAATTAAGTGCTATAG GAAACTTTTATTGTTTTCCATATTTAAATGCCATAGATGTTGCTAAAACACCACAATGGGTAAAGGATACTGTTTGGTAT CAAATATTCCCAGATAGATTTTGCAATGGAGATAAATCAATAGATCCAGAAAATGTTGAGCCATGGGGGACAGAGCCTAC TAGGGATAATTTTATGGGAGGAGATTTACAGGGAGTTTTAGATAAATTAGATTACTTATGCGATCTTGGAATTAATGGAC TATATTTTTGTCCAGTATTTGAAGCTACTGAGAATCATAGGTATGAAACTATAGATTATTTTAAAGTAGATCCAGCACTT GGTGGGAATGAAGTCTTTAAAAAACTTGTAAGTGAAGCTCACAAAAGAGGCATGAAAATAATGTTAGATGCAGTATTTAA TCATATAGGTTATTTTTCACCAAAATGGCAAGATGTATTAAAGAATAATGAAAAATCAAGATATAAGGATTGGTTTTGTA TAAAGAAGTTCCCAGTGCTTGAAAATGGCTTAGAAAATGTTGATGGAAATAATTTGAATTATGAAACCTTTGGAAGAATA GCCACAATGCCTAAACTAAATACTGAAAACCCAGAGGTTGTAGAATATTTATTAAAAGTCGCTAAGTTCTGGGTTGAAGA AATGGATATAGATGGTTGGAGACTTGATGTATGTAATGAAGTAGACCATGTATTTTGGAGAAAATTTAGGGAAGTAGTAA AGGGAACTAATAAAGAAGTTTATATATTAGGAGAAGTTTGGCATGATGGACTTCCATGGCTTATGGGAGATCAGTTTGAT TCAGTTATGAATTACCCTGTTACAGATGCAGTAAAAGAATATTTTTGTTTAAATCAATCTAATCCAGAAGATTTTAAATA TATGATAGAAGCTAATAAGGTTAGCTATTTAAGACAAATAGGAGAAACAATATTTAACTTGTTAGATAGTCATGATACTC CAAGAATATTAACTGTAGCTGGAGGAAATAAGGATAAGATGAAACTAGCTTATCTGTTTATGTTTACTCAAGCTGGCTCT CCATGTATATATTATGGAGATGAAGTTGGTATGGAAGGAAATCAAGGAATGGGTATGGAATTCCATAGAAGATGTATGAT TTGGGATGAAAATAAACAAGACAAAGATATGCTTAAGTTTATGAAACAAATAATAAAAATAAGAAAAGAAAATAAGGAAT TAAATTTATTAGATAATAATTGGATAAGAGCTAATAAGGATGAAAATATACTTATTTATTCAAAGGAAAATATATTTATA ATTATGAACAATTCAGAGAATGAAGAAAAGATATATTTACCTAAGGAGCTTAAAAATAATAAGATTAATGATTTATTTGA AGAAAAAATTGAACTCTTAAAAGAAGATATAGACTTAAAGCCCTTTGCATTTAAAGTTTATAAAAAGCTTTAA Protein sequence : MGKITREAIHHIAQSNYSYGYDNETLHLRVKTKKGEVNKVEIRIGDPYIWDEGGCDGGNMNATGGRWTGGKSYPMRKECE TKYFDHWIVGYKPLTKRSRYGFILYGDEETLLCTEKRIEELDGKYDEEKLSAIGNFYCFPYLNAIDVAKTPQWVKDTVWY QIFPDRFCNGDKSIDPENVEPWGTEPTRDNFMGGDLQGVLDKLDYLCDLGINGLYFCPVFEATENHRYETIDYFKVDPAL GGNEVFKKLVSEAHKRGMKIMLDAVFNHIGYFSPKWQDVLKNNEKSRYKDWFCIKKFPVLENGLENVDGNNLNYETFGRI ATMPKLNTENPEVVEYLLKVAKFWVEEMDIDGWRLDVCNEVDHVFWRKFREVVKGTNKEVYILGEVWHDGLPWLMGDQFD SVMNYPVTDAVKEYFCLNQSNPEDFKYMIEANKVSYLRQIGETIFNLLDSHDTPRILTVAGGNKDKMKLAYLFMFTQAGS PCIYYGDEVGMEGNQGMGMEFHRRCMIWDENKQDKDMLKFMKQIIKIRKENKELNLLDNNWIRANKDENILIYSKENIFI IMNNSENEEKIYLPKELKNNKINDLFEEKIELLKEDIDLKPFAFKVYKKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SPN23F_09660 | YP_002510949.1 | alpha-amylase | Not tested | PPI-1 | Protein | 2e-117 | 47 |
