Gene Information

Name : CPE0795 (CPE0795)
Accession : NP_561711.1
Strain : Clostridium perfringens 13
Genome accession: NC_003366
Putative virulence/resistance : Virulence
Product : iron(III) dicitrate ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 978511 - 979281 bp
Length : 771 bp
Strand : +
Note : similar to pir:G70022 iron(III) dicitrate transport permease homolog yusV from Bacillus subtilis (275 aa); 50.6% identity in 257 aa overlap; ATP-binding protein

DNA sequence : 
ATGATAAAAACAAATAATTTGAAATTGTGTTATGATGAAAAGATAATATTAGATGATATAAATATAGAAATAGAAAAAGG
GAAAATTACAGCGTTAATTGGACCTAATGGTTGTGGTAAATCTACTTTAATAAAGTCTATATCTAAGATACTTACTCCTA
AAAGTGGTGAAGTCTTAATGGGAGATAAAAATCTTCTTAAAATGCCACCAAAGGAATTAGCAAAAGAATTAGCAATGTTA
CCACAAAGCAGCAGTGCTCCAGAGGATTTAACTATTTATGATTTAGTTAAGCAGGGGAGATATCCTTATCATAACTTATT
ATCATTTTGGAGCAAAAAAGATGAGGAAATAGTAATGGAATCTATTAGAAAAATGGGACTAATAGAAGAAAAAGATAGGA
CTTTAGAAAATCTTTCTGGTGGACAAAGACAAAGAGCATGGATTGCCTTATCTTTATGTCAAGATACAGAAGTTATACTT
TTAGATGAACCTACAAATCATTTAGATATAAAGTATCAGCTAGAGATTTTAAATATTTTGAAAGAGCTTAATAGAAAAGA
AAATAGAACTATAGTAATGGTAATTCATGATATAAATCATGCTTTGAGATATGCTGATAATATAATAGCTTTAAAGGATG
GAAATATATTTGCTCAAGGTAGCAAAGATAAAATTATAAATGAAGATCTTATTAAAAATGTTTTTGATATTAAATGTAGA
ATTATAGATTCACCAATTGATAATAGTAAGATGTGCGTAACTTATATATAA

Protein sequence : 
MIKTNNLKLCYDEKIILDDINIEIEKGKITALIGPNGCGKSTLIKSISKILTPKSGEVLMGDKNLLKMPPKELAKELAML
PQSSSAPEDLTIYDLVKQGRYPYHNLLSFWSKKDEEIVMESIRKMGLIEEKDRTLENLSGGQRQRAWIALSLCQDTEVIL
LDEPTNHLDIKYQLEILNILKELNRKENRTIVMVIHDINHALRYADNIIALKDGNIFAQGSKDKIINEDLIKNVFDIKCR
IIDSPIDNSKMCVTYI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-53 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-53 49
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-54 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-54 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-54 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-54 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-49 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-49 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-49 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-49 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CPE0795 NP_561711.1 iron(III) dicitrate ABC transporter VFG0925 Protein 3e-56 41