|
Name : CPE0792 (CPE0792) Accession : NP_561708.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Virulence Product : iron(III) dicitrate ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0614 EC number : - Position : 975399 - 976349 bp Length : 951 bp Strand : - Note : similar to pir:C69805 iron(III) dicitrate transport permease homolog yfiY from Bacillus subtilis (325 aa); 48.4% identity in 279 aa overlap. N-terminal signal sequence was found by PSORT; binding protein DNA sequence : ATGAAAAAAAAATTACTATCTATAGCTTTATCAAGCTTAGTAGTTGTAAGCCTATTTATAGGTTGTTCTAATAAAAAAAT TAACGAAAATACAACTGTACCAACAAATATGGTATCAGTTGAACATGCAATGGGTACTACAGAAATACCTACTAATCCTC AAAAAGTTGTAATTCTTACTAGTGAAGGTACAGAAGCTCTACTTGCTCTTGGCGTTAAACCAGTAGGTGCTGTAACTGGA GTTACTGGTGATTGGTATGATCATACTAAAGACGAACTTGAAGGTGTAAAACAAGTCGGTATGGAAAGAGAGCCTAATAT AGAAGCAATTGCTGCTTTAAAACCTGATTTAATAATAGGAAATAAAATGAGACATGAAAAAATTTATTCTCAACTAAGTG CCATAGCTCCAACTGTTTACTCTGATACTATAAGAGGAGCATGGAAAGATAACTTTAAATTTTATGCAAAAGTTTTAAAT AAAGAATCTGAATCTGAAAAAGCTTTAAAAGAATATGATGATAAAATTGCTTATATTCAAAATAATTATAAAGATAAGCT AGATACAGAAATTTCACTTATTAGATTTATGTCTGGAAAAACTAGAATATATCTTGGAAATACTTTTGCTGGTACTATAT TAAAAGAAATAGGATTTAAGAGACCAGCATCTCAACAAAGTGATGAATTTGCCCTTGAAATTGGTAAAGAAAGATTAAAA GAAGCTGATGGAGATGTTCTATTCTACTTTACTTATGAAACTGGTGATGGTAAAGCTACTGCAAGAGAGCAAGAATGGAT GCAAGACCCTCTATTTAACTCATTAAATGCTGTACAAAATAATAAAGTCTATAAAGTAAATGACTTTATTTGGAATACTG CTGGTGGAATAAAATCAGCTAACTTAATGCTCGACGATTTAACTAATATGCTAAATGAAGGAAAATTATAA Protein sequence : MKKKLLSIALSSLVVVSLFIGCSNKKINENTTVPTNMVSVEHAMGTTEIPTNPQKVVILTSEGTEALLALGVKPVGAVTG VTGDWYDHTKDELEGVKQVGMEREPNIEAIAALKPDLIIGNKMRHEKIYSQLSAIAPTVYSDTIRGAWKDNFKFYAKVLN KESESEKALKEYDDKIAYIQNNYKDKLDTEISLIRFMSGKTRIYLGNTFAGTILKEIGFKRPASQQSDEFALEIGKERLK EADGDVLFYFTYETGDGKATAREQEWMQDPLFNSLNAVQNNKVYKVNDFIWNTAGGIKSANLMLDDLTNMLNEGKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fagD | YP_003782433.1 | iron-siderophore binding protein | Virulence | PiCp 1 | Protein | 6e-43 | 41 |
| fagD | YP_005680310.1 | Iron siderophore binding protein | Not tested | PiCp 1 | Protein | 9e-43 | 41 |
| fagD | YP_005682400.1 | Iron siderophore binding protein | Virulence | PiCp 1 | Protein | 9e-43 | 41 |
| fagD | YP_005684491.1 | Iron siderophore binding protein | Virulence | PiCp 1 | Protein | 9e-43 | 41 |
