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Name : pfoS/R (CPE0785) Accession : NP_561701.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Unknown Product : regulatory protein Function : - COG functional category : R : General function prediction only COG ID : COG3641 EC number : - Position : 969653 - 970711 bp Length : 1059 bp Strand : + Note : similar to pir:E71373 probable regulatory protein (pfoS/R) from Treponema pallidum (350 aa); 32% identity in 338 aa overlap. 10 transmembrane regions were found by PSORT. DNA sequence : ATGACACAAAAGAATGTTTCAAAGAAAGATAAGTTAACACCAAAAGATTATTTAAATAAAGTTTTGGCAGGAACTGCAAC AGGGATAGTTGTAGGGTTAATTCCTAATGCAATATTAGGATCAATTTTTAAAGGGCTAATAGGGGTTTCACCTATATTTT CTACTTTTTATAATGCCGTGAATATTATGCAGTTTATAGTACCTGTGCTTGTGGGAGTCTTAGTTGGATTACAGTTTGAA TTAAATGCTATGCAATCAGTTATAGTTGGAGCAGCAGTATTCTTAGGTTCAGGGGCATTTAAGGTTACTGAAGCAGGAGT ACAAATGGTTGGTATTGGAGACTTAATAAATATAATGTTAGTTTCTTGTATAGCTGTATTTGTTATTAGATTAATAGGAA ATAAATTAGGATCTTTAACTATATTATTACTACCTATTATAGCTGGCGCTGGAGTTGGTATAATAGGAATGTTTATGTTA CCTTATGTAAGACAAATTACCATAGTAATTGGAGATATAATGAATAACTTTACTACTTTACAGCCATTATTAATGTGTAT TTTAATAAGTGTTTCATTCTCAATATTAATTATTTCACCAATTTCAACTGTGGCAATAGGTATAGCTATTGGAATAACTG GCTTAGGAGCTGGGGCAGCTGCCATAGGAGTTACTGCTTGTACAGCAGTTTTAGTTGCAGGATCAAGAAGAGTAAATCAA AGTGGAGTTACTTTATCAGTATTATTAGGAGCTATGAAAATGATGATGCCAAACCTAGTAGAATACCCAATAATAGCAGT TCCAATAATAGCAAATGGAATACTAAGTGGAATAGGAGCTTATTTATTTAATATATTAGGTACACCTAATAGTGCAGGAT TTGGTATAGTTGGATTAGTTGGACCTTTAGCGGCTATAAATACTCCAGGGGCTACAAATGCTATATTTGGAGTAATAATG GCATTCTTTGTAATACCTTTTGTAGGAGCATTTATTATTGAATGGTTCTGTAGAAAAGTTATACATTTATATGATGAAAA TATTTTTAAATATATTTAA Protein sequence : MTQKNVSKKDKLTPKDYLNKVLAGTATGIVVGLIPNAILGSIFKGLIGVSPIFSTFYNAVNIMQFIVPVLVGVLVGLQFE LNAMQSVIVGAAVFLGSGAFKVTEAGVQMVGIGDLINIMLVSCIAVFVIRLIGNKLGSLTILLLPIIAGAGVGIIGMFML PYVRQITIVIGDIMNNFTTLQPLLMCILISVSFSILIISPISTVAIGIAIGITGLGAGAAAIGVTACTAVLVAGSRRVNQ SGVTLSVLLGAMKMMMPNLVEYPIIAVPIIANGILSGIGAYLFNILGTPNSAGFGIVGLVGPLAAINTPGATNAIFGVIM AFFVIPFVGAFIIEWFCRKVIHLYDENIFKYI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0516 | NP_814295.1 | hypothetical protein | Not tested | Not named | Protein | 3e-39 | 52 |
| ef0036 | AAM75242.1 | EF0036 | Not tested | Not named | Protein | 2e-39 | 52 |
