Gene Information

Name : rfbP (CPE0614)
Accession : NP_561530.1
Strain : Clostridium perfringens 13
Genome accession: NC_003366
Putative virulence/resistance : Virulence
Product : undecaprenyl phosphate galactosephosphotransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 770858 - 771520 bp
Length : 663 bp
Strand : +
Note : similar to prf:2312306A undecaprenyl phosphate galactosephosphotransferase from Anabaena sp. (252 aa); 52.8% identity in 195 aa overlap. 1 transmembrane region was found by PSORT

DNA sequence : 
ATGCAAAACATAAATGATATTCCAATTAAATCAGAGTGTAGTAAGGAAAAAAGCTATCTATTTTATAATGTTGCAAAAAG
ATGTTTTGACTTAATATGTTCGTTAATTGCGTTAATATTATTTTCACCAATATTTTTGATTTTATATATATGGGTGAAGG
TTGATTCTAAAGGACCAGCATTTTTTGGGCATAAAAGAATTGGTAAAGACAGAAAATATATAGATGTTTATAAATTTAGA
TCTATGGTTTCTAATGCAAAAGAGGTGTTTGATAATTTTACACCAGAGCAAAAAGCTGAATTTGAAAAGAATTTCAAGTT
AGATGATGATCCAAGAATAACTAAATGTGGAGCTTTTTTAAGAAAGACAAGTTTAGATGAATTACCTCAATTAATAAATA
TTATTAAAGGAGATATGAGCATTGTTGGACCAAGACCAATAGTAGATAAAGAAGTTGAAAAGTATGGTGAATATGCAGAC
AAGCTTTTCAGTGTTACACCAGGATTAACTGGTTATTGGCAAGCAAATGGAAGAAGTGACACAACATATGAAGAAAGAGT
ACAAATGGATATGTACTATATAGATAATAGATCTTTATGGCTTGATATTAAAATAATATTTAAGACGGTTATATCAGTTA
TAAAAAAAGAAGGAGCTGTATAG

Protein sequence : 
MQNINDIPIKSECSKEKSYLFYNVAKRCFDLICSLIALILFSPIFLILYIWVKVDSKGPAFFGHKRIGKDRKYIDVYKFR
SMVSNAKEVFDNFTPEQKAEFEKNFKLDDDPRITKCGAFLRKTSLDELPQLINIIKGDMSIVGPRPIVDKEVEKYGEYAD
KLFSVTPGLTGYWQANGRSDTTYEERVQMDMYYIDNRSLWLDIKIIFKTVISVIKKEGAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 1e-28 43
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 9e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rfbP NP_561530.1 undecaprenyl phosphate galactosephosphotransferase VFG1369 Protein 1e-22 43