Gene Information

Name : galF (CPE0510)
Accession : NP_561426.1
Strain : Clostridium perfringens 13
Genome accession: NC_003366
Putative virulence/resistance : Virulence
Product : UTP-glucose-1-phosphate uridylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : -
Position : 635095 - 636039 bp
Length : 945 bp
Strand : +
Note : similar to gpu:AP001519_167 UTP-glucose-1-phosphate uridylyltransferase from Bacillus halodurans (297 aa); 60.6% identity in 284 aa overlap. N-terminal signal sequence was found by PSORT

DNA sequence :
ATGAACAATAAAATAAGAAAAGCTATAATACCAGCAGCAGGTCTTGGTACTAGATTTTTACCTGCAACAAAGGCTCAGCC
TAAGGAGATGCTTCCAATAGTTGATAAGCCAACTATTCAATACATAATTGAGGAAGCTATAGCTTCAGGTATAGAGGAAA
TACTTGTTATTACAGGAAGAAGTAAAAAATCAATTGAAGATCACTTTGACCGTAATGTTGAACTTGAAATGGAACTTGAA
AAGTCAGGGAAAACTGAACTTTTAGATTTAGTTAGAGATATATCAGATATGGTTGATATCCATTATATAAGACAAAAAGA
ACCAAGAGGACTTGGACATGCTATCTACTGTGCTAAGACTTTCGTAGGGGATGAGCCTTTTGCTATATTACTTGGTGATG
ATGTAGTTTATAATGAAGAAAAGCCATGCTTAAAGCAATTAATTGATTGTTATAATGAATATAGAACTAGTGTATTAGGG
GTTCAAACTGTTCCAGAAGAAAATGTTTCTAAATACGGAATAGTTAATGGAAAACATATTGAAGGTAGAGTTTATAAAGT
AAAAGGCTTAGTTGAAAAGCCATCACCAGAAGAAGCACCTTCAAATGTTGCTATATTAGGAAGATATATAGTAACGCCAA
GAATATTTGATATATTAGAAAACACAAAACCTGGTAAAGGTGGAGAAATTCAATTAACAGATGCACTTTTAGAGCTTATG
AGCGAAGAGGCTATGTATGCTTATGACTTTGAAGGAAGAAGATATGATGTGGGAGATAAATTAGGATTCTTAGAAGCTAC
TGTTGAATATGCTTTAAGAAGACCAGATCTTAGAGATGGGTTTATTGATTACTTAAGAGAATTATCTGCTACAGAAAATA
TCTTTACTGAAGCAAATGGTAAAGAAAAAAAGGATAAAGAAGAAGAGCTTGTAACAGAAGCTTAA

Protein sequence :
MNNKIRKAIIPAAGLGTRFLPATKAQPKEMLPIVDKPTIQYIIEEAIASGIEEILVITGRSKKSIEDHFDRNVELEMELE
KSGKTELLDLVRDISDMVDIHYIRQKEPRGLGHAIYCAKTFVGDEPFAILLGDDVVYNEEKPCLKQLIDCYNEYRTSVLG
VQTVPEENVSKYGIVNGKHIEGRVYKVKGLVEKPSPEEAPSNVAILGRYIVTPRIFDILENTKPGKGGEIQLTDALLELM
SEEAMYAYDFEGRRYDVGDKLGFLEATVEYALRRPDLRDGFIDYLRELSATENIFTEANGKEKKDKEEELVTEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 3e-71 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
galF NP_561426.1 UTP-glucose-1-phosphate uridylyltransferase VFG0964 Protein 4e-72 55