Gene Information

Name : galF (CPE0506)
Accession : NP_561422.1
Strain : Clostridium perfringens 13
Genome accession: NC_003366
Putative virulence/resistance : Virulence
Product : UTP-glucose-1-phosphate uridylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : -
Position : 629121 - 630041 bp
Length : 921 bp
Strand : +
Note : similar to gpu:AP001519_167 UTP-glucose-1-phosphate uridylyltransferase from Bacillus halodurans (297 aa); 60.1% identity in 288 aa overlap. N-terminal signal sequence was found by PSORT

DNA sequence : 
GTGAATAAGAAAATAAGAAAAGCTATAATACCAGCAGCAGGTCTTGGTACTAGATTTTTACCTGCAACAAAGGCACAACC
TAAGGAGATGCTTCCAATAGTTGATAAGCCAACTATTCAATACATAATTGAGGAAGCTATAGCTTCAGGGATTGAAGAGA
TTCTTATTATTACAGGAAGAAGCAAAAAGTGTATTGAGGATCACTTTGATAAGTCAGTTGAGCTTGAAATGGAGCTTGAG
AAATCAGGTAAGAATGAACTTTTAGATTTGGTTAGGGATATATCAGATATGGTGGATATTCATTATATAAGACAAAAGGA
GCCAAGAGGACTTGGACATGCTATACATTGTGCAAAGACTTTTGTAGGGGATGAACCTTTTGCTATACTACTTGGGGATG
ATGTAGTTTATAATGAGGAAAAGCCATGTTTAAAACAGTTAATTGATTGTTATAATGAGTATAAAACTAGTGTATTAGGA
GTTCAAACTGTTCCAGAAAGTCATGTTTCTAAATATGGAATAGTAGATGGAAAACATATTGAAGGAAAGGTTTATAAGGT
TAAGGGATTGGTTGAAAAACCATCTGTTGAAGAAGCTCCTTCAAATGTTGCTATATTAGGAAGATACATAGTAACTCCAA
GAATATTTGATATTTTAGAAAAGACTAAGCCTGGAAAAGGTGGAGAAATTCAATTAACAGATGCTCTTCTAGAACTTATG
GGACAAGAAGCAATGTATGCTTATGACTTTGAGGGAAGAAGATATGATGTTGGAGATAAACTTGGATTCTTAGAAGCTAC
TGTTGAGTATGCTTTAAGAAGACCAGAGCTTAGAGAAGGATTTGTTGAATATCTAAATAATTTATCAGAAAAAGAATCTT
TATTCAAAAAAGAAGTTGAAAAAGAGATTGTTACTGTATAA

Protein sequence : 
MNKKIRKAIIPAAGLGTRFLPATKAQPKEMLPIVDKPTIQYIIEEAIASGIEEILIITGRSKKCIEDHFDKSVELEMELE
KSGKNELLDLVRDISDMVDIHYIRQKEPRGLGHAIHCAKTFVGDEPFAILLGDDVVYNEEKPCLKQLIDCYNEYKTSVLG
VQTVPESHVSKYGIVDGKHIEGKVYKVKGLVEKPSVEEAPSNVAILGRYIVTPRIFDILEKTKPGKGGEIQLTDALLELM
GQEAMYAYDFEGRRYDVGDKLGFLEATVEYALRRPELREGFVEYLNNLSEKESLFKKEVEKEIVTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 9e-71 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
galF NP_561422.1 UTP-glucose-1-phosphate uridylyltransferase VFG0964 Protein 6e-69 54