|
Name : CPE0473 (CPE0473) Accession : NP_561389.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Virulence Product : UDP-galactose phosphate transferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG2148 EC number : - Position : 593436 - 594053 bp Length : 618 bp Strand : + Note : similar to pir:T44837 probable UDP-galactose phosphate transferase from Acinetobacter lwoffii (203 aa); 55.1% identity in 196 aa overlap. N-terminal signal sequence was found by PSORT DNA sequence : ATGTCCAAAAAAAAAAATCGGATTTTTATAAAAAGAATTTTAGATATATGCGTTGCTTTAGGGTTGCTTATAGTGTTGTT TCCAGTAATTGTTATAGTTGCAGTTTTAGTTAAAACCAAACTTGGGAGCCCTATTATATTTACTCAAGAAAGAGTAGGAA AAGATAATAAAATTTTTAAAATGGTAAAATTTAGGACGATGAAAGAATGTATAGATAAAGATGGTAATATACTTCCAGAT GAAGAGAGATTAACGTCTTTTGGCAAGAAGCTGAGATCTTCAAGTTTGGACGAGCTTCCTGAACTAATAAATATATTGAA AGGAGATATGAGTTTAGTAGGGCCAAGACCACTACTTGTAGATTATCTTCCTTTATATAGTAAAGAACAAATAAGAAGAC ATGAAGTTCTACCAGGATTAACAGGCTGGGCACAAGTTAATGGAAGGAATAATCTTATATGGAACGAAAAGTTTGAACTT GATGTTTATTATGTAGAAAATTGGTCATTAACACTAGATTTAAAGATATTTTTTTTAACATTTTATAAGGTGTTTAAGAG AGAGGGGATAAATCAAGATGGACAAGTAACAATGGAATATTTTAATGGAGAAAATTAA Protein sequence : MSKKKNRIFIKRILDICVALGLLIVLFPVIVIVAVLVKTKLGSPIIFTQERVGKDNKIFKMVKFRTMKECIDKDGNILPD EERLTSFGKKLRSSSLDELPELINILKGDMSLVGPRPLLVDYLPLYSKEQIRRHEVLPGLTGWAQVNGRNNLIWNEKFEL DVYYVENWSLTLDLKIFFLTFYKVFKREGINQDGQVTMEYFNGEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1N | AAL26667.1 | type 8 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-21 | 44 |
| SSP0070 | YP_300160.1 | capsular polysaccharide synthesis protein | Not tested | SCC15305cap | Protein | 6e-21 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CPE0473 | NP_561389.1 | UDP-galactose phosphate transferase | VFG1369 | Protein | 8e-22 | 44 |
