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Name : CPE0418 (CPE0418) Accession : NP_561334.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Unknown Product : exo-alpha-1,4-glucosidase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 534362 - 536026 bp Length : 1665 bp Strand : + Note : similar to gp:BACEA14G_1 exo-alpha-1,4-glucosidase from Bacillus stearothermophilus (555 aa); 62.3% identity in 551 aa overlap DNA sequence : ATGAATAAAAAGTGGTGGAAAGAATTAATTGCTTACCAGATTTACCCTAAGAGCTTTATGGATTCTAATGGTGATGGTAT AGGTGATATTCAAGGTATAATATCTAAATTAGATTATTTAAAAGATTTAGGTATTGATTTAATCTGGTTATGTCCAATGT ATAAATCACCGAATCATGATAATGGTTATGACATTAGTGATTATAAAGATATCTTAGATGAATTTGGAACTATGGATGAT TTTAATGAATTGCTTAATGAGGTTCATAATAGAGGGATGAAGCTTATTATAGATTTAGTAATAAATCACACTAGTCATGA ACATCCATGGTTTATAGAATCAAGATCTTCTAGGGATAATCCTAAAAGAGATTGGTATATTTGGAGAGAAGGTAAAGGGG ATGAGGAACCTAATAACTGGGAAAGTATATTTAAAGGTTCAGCTTGGGAATTCTGTGAGAATAGTGAAGAGTATTACCTA CATTTATTTGCTAAAGAGCAACCAGATTTAAACTGGGAGAATAAAGAGGTAAGAAATGAACTATATAAAATGATAAACTG GTGGCTTGATAAGGGTATTGATGGGTTTAGAGTTGATGCCATAAGTCACATAAAAAAAGAAGAGGGTCTTAAGGATATGG ATAATCCAGAGGGACTTAAATATGTTTCATCCTTTGAAAAGCATATGAATGTAGAGGGAATAAATTCTCATCTTAAAGAA CTAAAAGAAGAAACTTTTTCAAAGTATAATATAGTTACAGTTGGAGAAGCAAATGGAGTTAGTGCCAATGAAGCTGATCA CTGGGTAGCTGAAGATGAGGGAACATTTAATATGATATTCCAATTTGAGCATCTTAATCTTTGGAATTATGAAGAGGGAC AAGGATTTGATGTGAAGGCATACAAAGATGTTTTAACAAATTGGCAAAATTCTTTAGAAGGTAAAGGATGGAATGCACTT TTCATTGAAAATCATGATATACCTAGAGTTGTTTCAACTTGGGGAAATGACAAGGAATATTTAACTGAATGTGCAAAAGC TTTTGGAGCAATTTATTTCTTACAAAAGGGAACCCCTTTCATATACCAAGGGCAAGAACTTGGTATGACAAATGTTAAAT ATCATAGCATATCTGAGTATAATGATGTTAAAACTATAAATACTTACAATGAAAGAATTGAAAGTGGTGTTTCAGAGGAA ATAGCATTAAAAGAAGCTTGGGTAACTTCAAGAGATAATTCAAGAACACCTATGCAATGGAATTCAAGTGAGAATGCAGG GTTTACTTGTGGAAAACCTTGGATAGGAGTTAATGAAAATTATAAAACAATAAATGTAGAAGTTGAAGAAAGGGATGAAA ATTCAGTTTTAAACTTCTATAAAAAGCTTATAAAACTTAAAAAGTCTAATGAAGCTTTAATCTATGGTGTATATGATTTA ATCCTTGAAGAGGATGAAAATATCTTTGCTTATACAAGAACTTTAAATAATGAAAAGTTCTTGATAATGGCTAATTTAAC TGGAGAAAATGCCAAGTACATGTATGAGAAAGAAAAACTTAATTCTAAGGATTTAATTCTTAACAATTATGAGGTTTGTG AACATAAAAACTTAACAGAGTTTACATTAAAACCTTATGAATGCAGAGTATATAAGCTTTCTTAA Protein sequence : MNKKWWKELIAYQIYPKSFMDSNGDGIGDIQGIISKLDYLKDLGIDLIWLCPMYKSPNHDNGYDISDYKDILDEFGTMDD FNELLNEVHNRGMKLIIDLVINHTSHEHPWFIESRSSRDNPKRDWYIWREGKGDEEPNNWESIFKGSAWEFCENSEEYYL HLFAKEQPDLNWENKEVRNELYKMINWWLDKGIDGFRVDAISHIKKEEGLKDMDNPEGLKYVSSFEKHMNVEGINSHLKE LKEETFSKYNIVTVGEANGVSANEADHWVAEDEGTFNMIFQFEHLNLWNYEEGQGFDVKAYKDVLTNWQNSLEGKGWNAL FIENHDIPRVVSTWGNDKEYLTECAKAFGAIYFLQKGTPFIYQGQELGMTNVKYHSISEYNDVKTINTYNERIESGVSEE IALKEAWVTSRDNSRTPMQWNSSENAGFTCGKPWIGVNENYKTINVEVEERDENSVLNFYKKLIKLKKSNEALIYGVYDL ILEEDENIFAYTRTLNNEKFLIMANLTGENAKYMYEKEKLNSKDLILNNYEVCEHKNLTEFTLKPYECRVYKLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-119 | 47 |
