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Name : CPE0287 (CPE0287) Accession : NP_561203.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Unknown Product : phage-related single-strand DNA binding protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0629 EC number : - Position : 366883 - 367227 bp Length : 345 bp Strand : + Note : similar to gp:BA1242593_64 SSB protein from Bacteriophage A118 (160 aa); 45% identity in 111 aa overlap; SSB DNA sequence : ATGAATAAAATAGTTTTATTAGGACGTTTAGTAAAGGATCCAGAGTTAAGATATGTAGAGGGTGGGGAGAAGGTATATAC AAAATTTACAATTGCTGTGGCAAGAAATTTTAAGTCTTCCACAGGAGAAAGAAAAAAAGATTTTATTCCAATAATAATGT GGGAGAAAAAAGCAGAGATAGCTTGTAAATATCTAAAAAAAGGAGATCTTTTAAGTGTTAGTGGAAGACTTATAACAAGA AGCTTTGAGGATACTGAAGGGAAGAGAAGATATATTGTAGAAGTATCTGTAGAAGACTTTAAATGTGTTAATTTTAATCA TGATAGGGTAGATAATAACTTTTAA Protein sequence : MNKIVLLGRLVKDPELRYVEGGEKVYTKFTIAVARNFKSSTGERKKDFIPIIMWEKKAEIACKYLKKGDLLSVSGRLITR SFEDTEGKRRYIVEVSVEDFKCVNFNHDRVDNNF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAOV_1956c | YP_005737400.1 | Single-stranded DNA-binding protein, phage associated | Not tested | ¥ÕSa3 | Protein | 1e-16 | 47 |
| SAOV_0290 | YP_005735807.1 | Single-stranded DNA-binding protein, phage associated | Not tested | ¥ÕSa1 | Protein | 2e-19 | 46 |
| SAOV_1081 | YP_005736576.1 | ssDNA-binding protein | Not tested | ¥ÕSa2 | Protein | 2e-19 | 46 |
| SAV0864 | NP_371388.1 | ssDNA-binding protein | Not tested | ¥ÕSa1 | Protein | 7e-19 | 45 |
| SH1792 | YP_253707.1 | single strand DNA binding protein | Not tested | ¥ÕSh1 | Protein | 2e-19 | 44 |
