|
Name : dnaC (CPE2634) Accession : NP_563550.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 3007583 - 3008917 bp Length : 1335 bp Strand : - Note : unwinds double stranded DNA DNA sequence : ATGGAAGCACCAGTAATGAAGAGTTTGCCACAAAGTATAGAAGCGGAACAATCTGTTTTAGGGGCAATGATAATAGATAG AACAACCATAGCTCAAGCCGCTGAGGTTTTAAATAAGGATTCATTTTATAGAGATGCTCATAAGGTAATATTTCAAAGTA TAATAGAAATGTACCAAAGAGATCAAGCCGTAGACCAATTAACTCTTTTAGAGTATTTAAAATCTACTGATAGACTTGAA AAAGCCGGTGGTATAAGTTATGTAACAGAGATAAGTGCATCTGTACTTAGTACAGTTAACATAAAATCATACATAAAAAT AGTTGATGAAAAAGCTATGCTTAGAAGACTTATAAAATCTTCTACAGAAATTATAGAGAATTGTTATAACAATCAAGAAG ATGTTGAAAAAGTTATAGATTCAGCAGAGAAGAAAATATTTGATTTATCTGAAAAGAGATCATCAAATGATTTTGAACCT TTAAGTGTTGTTCTTGAAAGAGGTTTTGAGCAAATAGAGGCTATATTTAATAATGAAGGAGAACTTACAGGTGTTGGTTC TGGATTTAAAGACTTGGATGAGATGACCTCTGGATTCCAAAAGGGTGATATGGTGCTTATAGCAGCAAGACCATCTATGG GTAAAACAACCTTTGCTCTTAACATAGCAGAACATGCTGCCTTAAGAGAGGGAAAGAGTGTTGTTATATTCTCTTTGGAA ATGTCAAAGGAACAGCTTGCATATAAGTTATTATGTTCAGAGGCTAATGTAGATATGTTAAGTCTTAGAACAGGTAAATT AACTCCTGAGGATTGGGACAATATAGCTAGAGCATCAGGCCCTTTAGCATCAGCTAAGATATACATAGATGATACTGCTG GGGTTTCTGTAATGGAAATGAGATCTAAGTGTAGAAGATTAAAAATGGAATATGGAATAGATCTTATACTTATAGACTAC TTACAACTTATGAGTGGAAGTGGTGAAAGTAGACAACAAGAGGTTGCGGAGATTTCAAGAAATATAAAAGCTATAGCTAA GGAGATGGAATGTCCAGTTATAGCATTATCTCAGCTTTCTCGTGCTCCAGAGCAAAGAGCAGACCATAGACCTATGTTAT CTGACCTTAGAGAATCTGGATCAATAGAGCAGGATGCTGACCTTGTTATGTTCTTATATAGAGATGAGTACTATAACAAG GAAACAGAAGATAAAAATGTTGGAGAATGTATAATAGCTAAGCAAAGAAACGGTCCAGTTGGAACAGTTAAGCTTGCATG GCTTGGTCAATACAGTAAATTTGCAGATTATGAAGCTATTCATAAGGATGTTTAA Protein sequence : MEAPVMKSLPQSIEAEQSVLGAMIIDRTTIAQAAEVLNKDSFYRDAHKVIFQSIIEMYQRDQAVDQLTLLEYLKSTDRLE KAGGISYVTEISASVLSTVNIKSYIKIVDEKAMLRRLIKSSTEIIENCYNNQEDVEKVIDSAEKKIFDLSEKRSSNDFEP LSVVLERGFEQIEAIFNNEGELTGVGSGFKDLDEMTSGFQKGDMVLIAARPSMGKTTFALNIAEHAALREGKSVVIFSLE MSKEQLAYKLLCSEANVDMLSLRTGKLTPEDWDNIARASGPLASAKIYIDDTAGVSVMEMRSKCRRLKMEYGIDLILIDY LQLMSGSGESRQQEVAEISRNIKAIAKEMECPVIALSQLSRAPEQRADHRPMLSDLRESGSIEQDADLVMFLYRDEYYNK ETEDKNVGECIIAKQRNGPVGTVKLAWLGQYSKFADYEAIHKDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-82 | 42 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-72 | 42 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-72 | 42 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-74 | 41 |
