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Name : CPE2496 (CPE2496) Accession : NP_563412.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Unknown Product : nucleoside transporter Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG1972 EC number : - Position : 2857918 - 2859144 bp Length : 1227 bp Strand : + Note : similar to pir:H82087 NupC family protein VC2352 from Vibrio cholerae (group O1 strain N16961) (418 aa); 43.4% identity in 401 aa overlap. N-terminal signal sequence and 8 transmembrane regions were found by PSORT. DNA sequence : GTGGATAGGTTTATTGGTGTAATCGGTCTTATTTGTATTATTGGTATAGCTGTTCTTTTTTCTGAAAACAGAAAGAAGAT CAACTGGAGATTGGTTGGAACAGGTCTTTTATTACAAATTATTTTCGCTTTATTAATCCTAAAAGTTCCTGCTGGTAGAG CAGTATTTGAATGGATTAGTAACGGAATAACTAAGTTATTAGATTTTACTAAAGAAGGTAGTTCATTCTTATTTGGACCA TTACTTGATACAGACAAATTCGGTATGATATTTGCTCTACAAGTATTACCAACTATTATCTTCTTCTCATCATTAATGAG TGTACTTTATCATTTAGGTATAGTTCAAGTAGTAGTTAAAGTTATTGCTAAGGGTGTTGCTAAAGTATTAGGAACAAGTG GTGCTGAAACTTTCAGTGCAGTTGGTAATATCTTCTTAGGCCAAACAGAGGCTCCTCTACTAGTTAAACCATACATAAAG AACATGACTAGATCAGAAATATGTGCAATCATGGTAGGTGGTATGGCTACTGTTGCCGGTGGTGTTATGGCTGGTTATGT AGCTATGGGTGTTAACGCTGGTAACTTATTAGCAGCATCAATCATGGCAGCTCCTGCTGGATTAATATTAGCTAAAATAT TAGTTCCTGAAACTGAAGTTCCTGAAACTAAAGGTGGCGGAACTTTAGAACTTAAAGTTGAAAGTGAAAATGTTATTGAA GCTGCTGCAAACGGCGCTTCAGAAGGTTTAGGATTAGCTTTAAACGTTGGTGCTATGCTTCTTGCATTCGTTGCTCTTAT AGCTATGATCAATGCTTTATTTGGAGCAATAGGTGGAATATTTGGTGCACCTTGGTTAAGCTTAAACTGGATTCTTGGTA GATTATTCTCTCCATTAGCATTCATAATGGGAGTTCCAACTAAAGACGTTTTCGCAGCTGGAGACTTACTAGGAATTAAA TTAGCAGTTAACGAATTCTTAGCTTACTCACAATTATCAAACTACATAGCAAGCGGAACTTTAGAACCTAAGACTATAAT GATATTAACTTATGCTCTTTGTGGATTCGCTAACTTAAGTTCAGTTGCTATACAATTAGGTGGTATTGGTGGATTAGCTC CAGAAAAGAAACCAATTATAGCTAAGTTAGGATTCAAAGCACTTTTAGGTGGTGTATTAGCTACTTGTATGACAGCTACT ATAGCAGGTATCTTATTTAGTGCTTAA Protein sequence : MDRFIGVIGLICIIGIAVLFSENRKKINWRLVGTGLLLQIIFALLILKVPAGRAVFEWISNGITKLLDFTKEGSSFLFGP LLDTDKFGMIFALQVLPTIIFFSSLMSVLYHLGIVQVVVKVIAKGVAKVLGTSGAETFSAVGNIFLGQTEAPLLVKPYIK NMTRSEICAIMVGGMATVAGGVMAGYVAMGVNAGNLLAASIMAAPAGLILAKILVPETEVPETKGGGTLELKVESENVIE AAANGASEGLGLALNVGAMLLAFVALIAMINALFGAIGGIFGAPWLSLNWILGRLFSPLAFIMGVPTKDVFAAGDLLGIK LAVNEFLAYSQLSNYIASGTLEPKTIMILTYALCGFANLSSVAIQLGGIGGLAPEKKPIIAKLGFKALLGGVLATCMTAT IAGILFSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yutK | YP_005163383.1 | putative sodium/nucleoside cotransporter | Not tested | Not named | Protein | 9e-43 | 43 |
