Name : clpC (CPE2441) Accession : NP_563357.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence MecB/ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2788268 - 2790712 bp Length : 2445 bp Strand : - Note : similar to sp:CLPC_BACSU NEGATIVE REGULATOR OF GENETIC COMPETENCE CLPC/MECB from Bacillus subtilis (810 aa); 53.1% identity in 813 aa overlap DNA sequence : ATGCGTCTTGATAATTTTAATGAAAATTCCAAAATAGTAATCAATAAGGGAAAAGAAAGTTCTTTAATGCTAAAACACGG CTACATGGGAACAGAGCATTTATTAATAGGATTAATTAATGAAAATGGACAATGTTCTAAAATTTTGGAAGAAAGCAATG TAACTGAAGAAAAGGTACTTAGTTTTATTAAGCTATATGTTGGAATTGGAGAGGTAAATTATAGTTTAGATGAGGTGCCT TTTACGCCTAGATGCAAAAAGATTTTAGATAGAAGTGTTGAAATTGCTAAGGAATATGGTCATAGTATTTCAAGACCAGA GCACATATTATTAGCCTTAATAAAAGAAAGAGAAGGTGTAGCTAATTTAATTCTAACTAAAATAGTAAAAAATGATATAA AAAATATAAGTGATAAGTTAAATAACATACTAGGTAGAATTCCAAGTAAGGAAAGTAAAAGCCTTAAGGAAAAGGAAAAA CCAAAAAGAAAAGATACTCCTACATTAAATCTTTATGGTATAAATTTAATAGAAAGGGCAGATAAAAATAAGCTTGATCC TGTAATAGGGAGAAAGGATGAAACTCAAAGACTTTTAGAAATACTTTGTAGAAGAATGAAAAATAATCCTTGTTTAATAG GAGAACCTGGAGTAGGAAAAACTGCCGTTGTTGAAGGCTTAGCTCAGAGGATTTTATTAGGTGAAGTACCGGATATTATT AAGGATAAAAGAATATTTACCTTAGATGTGACTTCTATGTTAGCTGGGGCAAAATATAGAGGAGAATTTGAGGAAAGACT TAAAAAGGTTTTAAACGAAGTAAAAGATTCAGATGATATAATACTCTTTATAGATGAAATGCATAATATTGTTGGGGCTG GTGGAGCAGAAGGTGCTATAGATGCATCAAATATATTAAAACCAGCTTTAGCAAGAGGTGAAATACAATGTATAGGTGCG ACAACAACTGATGAATATAGAAAAAATATAGAAAAGGATTCTGCTTTAGAGAGAAGATTCCAACCAGTAGTTGTAAAAGA GCCTAGTAAAGAAGATTCCGTATTAATATTAAAGGGATTAAGAGAAAAGTATGAAGTACATCACAATGTAAAATTAACAG ATGAAGCCATAGAGGCAGCTGTTAATTTATCAAGTAGATATATAACAGATAGATTTCTACCAGATAAGGCCATAGATCTA ATAGATGAGGCTGCGGCAAAGGTAAGAATAGAAAGTATGATTGTTCCTCCTAGACTTTTTAAGCAGGAAGAATTAATAGC TAACTTAAAAGTTGAAAAAGAAGAAGCTATAAAATTACAGGACTTTGAATTAGCTGCAAAGTTAAGAGATGAAGAATTAA TGTTACAGGAAGAACTAGAGCGAGATAAAGAACTTTGGAGAGAAGAAAATTATAATAAAATCTACGAAGTTAATAAAGAA CATATTGCAAAGGTTGTTTCAAAGTGGACTCAGATACCAGTAGAAAGGCTTACAGAGAAAGAATCTAGTAGACTTCTTAA GCTAGAAGAAAAGCTTAGTAAAAGAGTTATAGGACAATTAGAAGCAATAAGAACCATATCAAAGGCTGTAAGAAGATCAA GGGTAGGTCTTAAAGATCCTAAAAGGCCTATTGGATCCTTTGCCTTTTTAGGACCTACTGGAGTAGGGAAAACAGAGCTT TGTAAGGCTTTAGCAGAGGCTATGTTTGGTGATGAGAATAAATTTATTAGACTTGATATGTCTGAATATATGGAAAAGCA TGGTGTATCTAGACTTATTGGAGCTCCTCCAGGATATGTAGGATATGAAGAGGGTGGTCAGCTTACAGAAAAGGTAAGAA GAAATCCTTACTCAGTAATACTTTTTGATGAAATAGAGAAAGCACATCCAGATATATTTAATGTTCTTCTTCAAATATTA GAAGATGGTGTTCTTACAGATGGAAAAGGTAAAACAGTAGATTTTAAGAATACAATAATCATAATGACTTCAAATATTGG AGCAGATAAATTAGATAAGAAAAATGCAGTTGGATTTAGTGCTAAAGAGGATAAGGAACGAGATTATGATAAAATGAAAG GAATTATGTTAGAAGAGCTAAAACAAAACTTCAAACCGGAATTTGTAAATAGATTAGATGACATAGTTGTATTCCATAGT TTAGAAAAGGATCATCTTTTAAAAATTGTTGATCTTATGATATGTTCTCTAAAAGAGAGGTTAAATGATTTACAACTTTC TTTGAATTTTTCTCAAGAGTGTAAAGAATTTTTAGTTAAAAAGGGCACTGAATTAAAATATGGAGCACGTCCATTAAGAA GAGTTATAACTAAATATATTGAAGATAGATTAAGTGAAGAACTTTTAAGTGGAAATATATTAAGAGGATCTAAGGTTGAT GTTTTCTTAGAAGACGACGTTGTAAAATTTAAAAAAACTGTTTGA Protein sequence : MRLDNFNENSKIVINKGKESSLMLKHGYMGTEHLLIGLINENGQCSKILEESNVTEEKVLSFIKLYVGIGEVNYSLDEVP FTPRCKKILDRSVEIAKEYGHSISRPEHILLALIKEREGVANLILTKIVKNDIKNISDKLNNILGRIPSKESKSLKEKEK PKRKDTPTLNLYGINLIERADKNKLDPVIGRKDETQRLLEILCRRMKNNPCLIGEPGVGKTAVVEGLAQRILLGEVPDII KDKRIFTLDVTSMLAGAKYRGEFEERLKKVLNEVKDSDDIILFIDEMHNIVGAGGAEGAIDASNILKPALARGEIQCIGA TTTDEYRKNIEKDSALERRFQPVVVKEPSKEDSVLILKGLREKYEVHHNVKLTDEAIEAAVNLSSRYITDRFLPDKAIDL IDEAAAKVRIESMIVPPRLFKQEELIANLKVEKEEAIKLQDFELAAKLRDEELMLQEELERDKELWREENYNKIYEVNKE HIAKVVSKWTQIPVERLTEKESSRLLKLEEKLSKRVIGQLEAIRTISKAVRRSRVGLKDPKRPIGSFAFLGPTGVGKTEL CKALAEAMFGDENKFIRLDMSEYMEKHGVSRLIGAPPGYVGYEEGGQLTEKVRRNPYSVILFDEIEKAHPDIFNVLLQIL EDGVLTDGKGKTVDFKNTIIIMTSNIGADKLDKKNAVGFSAKEDKERDYDKMKGIMLEELKQNFKPEFVNRLDDIVVFHS LEKDHLLKIVDLMICSLKERLNDLQLSLNFSQECKEFLVKKGTELKYGARPLRRVITKYIEDRLSEELLSGNILRGSKVD VFLEDDVVKFKKTV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 51 |
STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-88 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
clpC | NP_563357.1 | negative regulator of genetic competence MecB/ClpC | VFG0079 | Protein | 0.0 | 53 |
clpC | NP_563357.1 | negative regulator of genetic competence MecB/ClpC | VFG0080 | Protein | 2e-148 | 53 |