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Name : rph (CPE2254) Accession : NP_563170.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 2587100 - 2587846 bp Length : 747 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGAGAAGTAGTGGAAGAAAAAAAGAACAGATAAGACCAGTTAAAATAACAAGAAACTTTACTAAATATGCAGAAGGCTC TGTATTAATAGAAGTTGGGGATACTAAAGTATTATGTACTGCTTCAATAGAAGAGAAAGTTCCACCTTTTTTAAAGGGTT CTGGAGAAGGATGGATAACTGCTGAATATAACATGCTTCCAAGAAGTACTCAAAGTAGAAAACAAAGAGATATAAATAAA CTTAAAATAGATGGAAGAACAATGGAAATACAAAGACTTATAGGAAGAGCTCTTAGATCAGCTGTAGATATGAAAGCTTT AGGAGAAAAAACTATTTGGATAGACTGTGACGTTCTTCAAGCTGATGGGGGAACTAGAACGACTTCTATTACAGGTTCAT TTGTGGCATTAGTTGATGCTGTAAATAAACTTCATCAAAAGAAACCTTTCAATGTTTATCCTATAAGACATTTTGTCAGC GCAGTAAGTGTTGGAATAGTAGGGGAAGAGAAAATATTAGACTTATGCTATGAAGAAGACCATGTAGCTAAAGTAGATAT GAATGTTGTAATGACAGAAGAGGGAGAATTTATAGAAATTCAAGGAACTGGAGAGGCTGGACCTTTTTCAAGAAAAGAAT TAGATGAATTATTAAATCTTGCTGAAAAAGGAGCAAAACAAATGATACAAGCACAAAAAGATGCTTTAAAGACAGATTCT TTATGGATCGGAACAGGGAGAGAGTAA Protein sequence : MRSSGRKKEQIRPVKITRNFTKYAEGSVLIEVGDTKVLCTASIEEKVPPFLKGSGEGWITAEYNMLPRSTQSRKQRDINK LKIDGRTMEIQRLIGRALRSAVDMKALGEKTIWIDCDVLQADGGTRTTSITGSFVALVDAVNKLHQKKPFNVYPIRHFVS AVSVGIVGEEKILDLCYEEDHVAKVDMNVVMTEEGEFIEIQGTGEAGPFSRKELDELLNLAEKGAKQMIQAQKDALKTDS LWIGTGRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 5e-62 | 57 |
