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Name : CPE2157 (CPE2157) Accession : NP_563073.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Unknown Product : PTS system glucose-specific transporter subunit IIBC Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1263 EC number : - Position : 2470664 - 2472193 bp Length : 1530 bp Strand : - Note : similar to gpu:AP001510_19 PTS system, glucose-specific enzyme II, A component from Bacillus halodurans (675 aa); 57.3% identity in 504 aa overlap. N-terminal signal sequence and 7 transmembrane regions were found by PSORT.; glucose-specific enzyme IIA co DNA sequence : ATGAAGAAAGCTTTTGGAGTTTTACAAAGAATAGGTAAAGCTTTGATGTTACCAGTTGCTTTATTACCAGCGGCAGGTTT ATTACTTGGATTTGGATCAATGTTTCAAGATCCTCAGTTTTTAAGCTTAGTGCCAGCATTAAATGCAGGGTGGTTTCAAT TAATAGCTACAATAATGTCTGATGCAGGTAATATAATATTTTCAAACTTAGCATTGTTATTCGCAGTTGGGGTAGCTGTA GGATTATCAGAAGGAGACGGTGTTGCAGGTCTTGCAGCAATAGTTGGTTTTTTAATACTTAATGTAACAATGGGAATTGG TGGAGGAATAACTGCCGACATTGTTGCTGGTACTAAAAATGGTATGTATGCCACAGTTCTTGGAATACCAACACTTCAAA CTGGAGTATTTGGTGGAATTATTATGGGAGTTATAGCCGCAGCTTTATATAAAAGGTTCTATAAGATAGAATTACCTTCA TACTTAGGATTCTTTGCAGGTAAAAGATTTGTTCCAATAGTGACTGCTGTTTCAGCTTTAGTGCTTGGAGGAATAATGGT ATTTGTATGGCCTCCAATACAAGGTGCCTTATTGTACTTCTCACAAAATATGATAAGTGCTAATCAAACCCTATCAGCTT TATTATTTGGAATAATAGAAAGAGCATTAATTCCATTTGGATTACATCATATTTGGTATAATCCATTCTGGTTCCAATTT GGAGAATACACAAATAAAGCAGGTCAATTAATAATGGGAGATAATCAAATATTCTTTGCCCAATTAAGAGATGGAGTTCC ATTTACAGCAGGTACCTTTATGACTGGTAAGTTCCCATTTATGATGTTTGGATTGCCAGCAGCAGCCTTAGCAATGTATC ATGAAGCTAAACCAGGTAAAAAGAAAATAGCTTCAGGTATTTTATTCTCAGCTGCCTTAACTTCCTTCTTAACAGGAATT ACTGAGCCTTTAGAGTTTGCATTCTTATTTGTTGCGCCAGTATTATTTGCAATCCACTGTGTATTAGCAGGCTTATCCTT TATGATAATGCAATTATTAAATGTTAAAATAGGTATGACTTTCTCAGGTGGACTTTTAGACTTTATACTATTAGGAGTAA TTCCAAATAGAACTAGATGGTGGTTAGTAATACTTGTAGGATTAGGCTTTGCTGTAATTTACTATTTCTTATTTAGATTC TTTATTAGAAAGTTTGATCTTAAGACTCCAGGTAGAGAAGATGATGATATATTTGATGATATGGATAACCAAACTGTAAA TGATGACTTAGCTGCTGAAATTTTAATAGCTTTAGGCGGTGCAGGCAATATAAATAAATTAGATGCTTGCATAACTAGAT TAAGAGTTACAGTTAATGATTCAAGCAAAGTTAATAAAGAAAGATTAAAAGAGCTTGGAGCAGCTGGTGTAATGCAAGTT GGAGAAAATATTCAAGCTATATTTGGAGGAAAATCAGATATACTTAAAACTCAAATTAGAGAAATTATGAATGGCATGGG AGAAAAGTAG Protein sequence : MKKAFGVLQRIGKALMLPVALLPAAGLLLGFGSMFQDPQFLSLVPALNAGWFQLIATIMSDAGNIIFSNLALLFAVGVAV GLSEGDGVAGLAAIVGFLILNVTMGIGGGITADIVAGTKNGMYATVLGIPTLQTGVFGGIIMGVIAAALYKRFYKIELPS YLGFFAGKRFVPIVTAVSALVLGGIMVFVWPPIQGALLYFSQNMISANQTLSALLFGIIERALIPFGLHHIWYNPFWFQF GEYTNKAGQLIMGDNQIFFAQLRDGVPFTAGTFMTGKFPFMMFGLPAAALAMYHEAKPGKKKIASGILFSAALTSFLTGI TEPLEFAFLFVAPVLFAIHCVLAGLSFMIMQLLNVKIGMTFSGGLLDFILLGVIPNRTRWWLVILVGLGFAVIYYFLFRF FIRKFDLKTPGREDDDIFDDMDNQTVNDDLAAEILIALGGAGNINKLDACITRLRVTVNDSSKVNKERLKELGAAGVMQV GENIQAIFGGKSDILKTQIREIMNGMGEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2642 | YP_859416.1 | PTS system, glucose-specific IIBC component | Not tested | Not named | Protein | 2e-109 | 55 |
| ef0067 | AAM75272.1 | EF0067 | Not tested | Not named | Protein | 5e-71 | 43 |
