Gene Information

Name : CPE2092 (CPE2092)
Accession : NP_563008.1
Strain : Clostridium perfringens 13
Genome accession: NC_003366
Putative virulence/resistance : Resistance
Product : amino acid ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 2400141 - 2400878 bp
Length : 738 bp
Strand : -
Note : similar to sp:YXEO_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YXEO from Bacillus subtilis (249 aa); 61.4% identity in 241 aa overlap; ATP-binding protein

DNA sequence : 
ATGATAAAGGTTAAAAATCTTAAAAAGAGCTATAAAAATTTAGAAGTTTTAAAAGATGTTAACATGGAAGTTAAACAGGG
AGAGGTAGTTGTTATAATAGGACCTTCAGGTTCAGGTAAGTCAACTTTCCTAAGATGTTTAAATTATTTAGAATCACCAG
ATAAGGGAGAAATCCAAGTTGGTCATGTGAAAGTAAATGCTGAAAAAATAAGCAAAAAAGAAATTAATGACTTAAGAAAA
CAATCAGCAATGGTATTTCAGCATTATAATTTATTCAATAACAAAACAGTTCTACAAAATGTTACGGAAGCATTAATTGT
AGTAGAAAAAATGGATAAGAAAAAGGCAGAGGAAATTGCCTTAGAAAATTTAAAGAAGGTAGGTATGGTTGATAAAAAGG
ATAATTATCCAAATACCTTATCAGGAGGACAAAAACAAAGGGTTAGTATAGCGAGAGCTATGGCTATAAATCCCAATGTT
ACCCTTTTTGATGAACCTACATCAGCCTTAGATCCAGAATTAGTAGCAGAAGTATTAGCTGTTATAAAAGATTTGGCCAA
GGAACATAAAACAATGATAATAGTTACCCATGAAATGAGCTTTGCAAGGGATGTAGCAGATAGAGTTGTATTTATGGATG
GAGGAATAGTTTTAGAGGAAGGTACTCCAGAGGAAATTTTTAAAAATCCTAAAAATGAAAGAACAAAACAGTTTCTTGAA
AGATTTATAGTTAATTAA

Protein sequence : 
MIKVKNLKKSYKNLEVLKDVNMEVKQGEVVVIIGPSGSGKSTFLRCLNYLESPDKGEIQVGHVKVNAEKISKKEINDLRK
QSAMVFQHYNLFNNKTVLQNVTEALIVVEKMDKKKAEEIALENLKKVGMVDKKDNYPNTLSGGQKQRVSIARAMAINPNV
TLFDEPTSALDPELVAEVLAVIKDLAKEHKTMIIVTHEMSFARDVADRVVFMDGGIVLEEGTPEEIFKNPKNERTKQFLE
RFIVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 5e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CPE2092 NP_563008.1 amino acid ABC transporter NC_012469.1.7686878. Protein 7e-31 41