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Name : deoA (CPE1807) Accession : NP_562723.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : - Position : 2086621 - 2087922 bp Length : 1302 bp Strand : - Note : similar to sp:PDP_BACSU PYRIMIDINE-NUCLEOSIDE PHOSPHORYLASE (EC 2.4.2.2) (PYNP) from Bacillus subtili (434 aa); 62.7% identity in 432 aa overlap. 2 transmembrane regions were found by PSORT. DNA sequence : ATGAGAATGTATGATTTAATATTAAAAAAGAGAAATGGTGGGGAATTAAGCACTGAAGAAATAAACTTTTTTGTTGATAA ATATACAAATGGTGAAATACCAGATTATCAAGTAGCAGCCTTATTAATGGCTATATATTTCCAAAAAATGAATAAGAGAG AAACTTCAGATTTAACTATGGCTATGGTTAATTCAGGAGATATATTAGATTTAAGTGAAATACACGGTATAAAAGTAGAT AAGCATTCAACTGGTGGGGTTGGTGATACTACTACTTTAGTTTTAGGACCTATGGTTGCAGCTTTAGGAATTCCTGTAGC TAAAATGTCAGGAAGAGGTCTTGGACATACTGGTGGAACAATAGATAAATTAGAAAGTTTTGATGGATTCTCAGTAGAAA TGACTAAGGATCAATTTATAAATAATGTTAATAATATAAAATTAGCAGTTGGTGGACAAACAGGAGATTTAGCTCCAGCT GATAAAAAACTTTATGCTTTAAGAGATGTTACTGGAACTGTTGATAATGTATCATTAATAGCTTCAAGTATTATGAGTAA AAAAATTGCTGCAGGCGCTGATGCCATAGTATTAGACGTTAAGGTTGGAGATGGAGCATTTATGAAAACTCCAGAGGCAG CTAGAGAACTTGCAACTGAAATGGTTGGAATAGGTAAACATGTTGGAAGAAATACTGTTGCCATAATTTCAGATATGGAT CAACCTTTAGGATTTGCTATAGGTAATGCATTAGAAGTTAAAGAAGCCATAGAAACTTTAAGAGGAAATGGTCCTAAGGA TCTTTTAGAGCTTTGCTTAACACTTGGAAGCAACATGGTTGTTTTAGCAGGTGCTGCTAAAGATACTGATGAAGCAAGAA AAATGTTAATGGAAACAATAACTTCAGGAAAAGCAATTGAAAAATTAAAAGAATTTGTAAAAGCTCAAGGTGGAGATGCA TCAGTTATTGATGATATATCAAACTTCCATAATGCTAAATATGTAATTCCAGTTAAAGCTACTAAATCAGGAGTTGTAAG CAAAATACATGCTGAAAACATAGGATTAGTTGCTATGGAACTTGGAGCAGGAAGAGCTACTAAAGAAAGTATTATAGATT TAGCTGTTGGTATTGTTCTTCAAAAGAAAAGAGGAGACAAAGTTAATGAAGGAGATATAATAGCATATATTCATGCTGAT GATGAAGAAAAAGGTAAGAAAGCAGTAGATGGAATATTAGCTAATTACGAAATATCAGATTCAGTAAAAGATATTCCATT AATATATGATATAGTTAAATAG Protein sequence : MRMYDLILKKRNGGELSTEEINFFVDKYTNGEIPDYQVAALLMAIYFQKMNKRETSDLTMAMVNSGDILDLSEIHGIKVD KHSTGGVGDTTTLVLGPMVAALGIPVAKMSGRGLGHTGGTIDKLESFDGFSVEMTKDQFINNVNNIKLAVGGQTGDLAPA DKKLYALRDVTGTVDNVSLIASSIMSKKIAAGADAIVLDVKVGDGAFMKTPEAARELATEMVGIGKHVGRNTVAIISDMD QPLGFAIGNALEVKEAIETLRGNGPKDLLELCLTLGSNMVVLAGAAKDTDEARKMLMETITSGKAIEKLKEFVKAQGGDA SVIDDISNFHNAKYVIPVKATKSGVVSKIHAENIGLVAMELGAGRATKESIIDLAVGIVLQKKRGDKVNEGDIIAYIHAD DEEKGKKAVDGILANYEISDSVKDIPLIYDIVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 2e-73 | 47 |
