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Name : CPE0157 (CPE0157) Accession : NP_561073.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Unknown Product : sortase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3764 EC number : - Position : 201393 - 202148 bp Length : 756 bp Strand : + Note : similar to gp:AF019629_2 fimbria-associated protein from Actinomyces naeslundii (365 aa); 39.5% identity in 205 aa overlap. 1 transmembrane region was found by PSORT DNA sequence : TTGTTATATCCTAGTTTTTCTAATTACATAAATAATAAATTTGCAGTTTCTACAATTTCTGATTATACAGAGAAGATAAA TAATGTTAAGGATGAAGAGGTTGATGATTTAATAAAAAATATTAATAAGTATAATTATGATTTATTTAATGGAACTGCTG AAAATCAATTGCCAGATTACTTAAATATTCATCAGGGGGATGTCTTAGGGTACATAGAAATTCCTAGTATAAATATTAAG TTACCTATATACTATGGAACTTCAGTTGATATTTTGAAAAAAGGAGTTGGAGTTTTAGAGGGGACATCACTTCCTGTAGG AGGGGAGAATACTCATTCAGTTTTATCAGCTCATACTGGATTAGCAAATCAAAAGCTCTTTACTGATATAGACAAGCTAA AAGATGGAGATGTTTTTTATTTACATATTTTAAAAAAGGATCTTGCTTATAAAGTTAATCAAATAAAAGTTGTTCACCCA GATGAAATTGATGAACTAAAAATATCAGATGAAAAGGACTATGTAACTTTACTAACTTGTTATCCTTATGGAATTAATAC TGAACGTTTATTAGTAAGGGGAGAGAGAACTGATTTAAGTCCAAGTAATGTAGAGCAGGTTCAAAAGGAAATAAGCACTT TTAATCATTCAAATGAAAATTTAATACTAATAGTTATAATATTAATTTCAGTACTAATAATTATTTTCTTATTGTTTTTA ATTATGAAATTTAAAGGGAAAAATAAGAGTAGATAA Protein sequence : MLYPSFSNYINNKFAVSTISDYTEKINNVKDEEVDDLIKNINKYNYDLFNGTAENQLPDYLNIHQGDVLGYIEIPSINIK LPIYYGTSVDILKKGVGVLEGTSLPVGGENTHSVLSAHTGLANQKLFTDIDKLKDGDVFYLHILKKDLAYKVNQIKVVHP DEIDELKISDEKDYVTLLTCYPYGINTERLLVRGERTDLSPSNVEQVQKEISTFNHSNENLILIVIILISVLIIIFLLFL IMKFKGKNKSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| srtC | YP_005137206.1 | putative fimbrial associated sortase-like protein | Not tested | Not named | Protein | 1e-35 | 42 |
