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Name : CPE0139 (CPE0139) Accession : NP_561055.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1943 EC number : - Position : 179861 - 180331 bp Length : 471 bp Strand : + Note : similar to gp:AF125554_2 transposase from Enterococcus faecium (156 aa); 72.4% identity in 156 aa overlap DNA sequence : ATGGACAATAGTAGCTTAGCACATAGCAAGTGGAATTGCAAATACCATATAGTTTTTGCACCGAAGTATAGAAGACAAAT AATTTATGGAAAAATAAAATCAGATATAGGAGCAATATTAAGAAAGTTATGTGATCAAAAAGGAGTGGAAATAATAGAAG CAAATGCATGTAAAGACCATATAAATATGCTTGTAAGTATTCCACCAAAACTAAGTGTTTCTCAATTTATGGGATATTTG AAAGGGAAAATTTCTTTGATGATTTTTGATAGACATGCTAACTTAAAATATAAGTATGGGAATAGACAATTTTGGTGTAA AGGATATTATGTTGATACAGTTGGAAGAAATAAAAAGGCGATAGAAGAATATATTAAAAATCAAATACAGGAAGATATAG CATATGAACAAATAAGTTTAAAAGAGTATATTGACCCGTTTACGGGTGAGCCGATAAAGAAAAACAGATAA Protein sequence : MDNSSLAHSKWNCKYHIVFAPKYRRQIIYGKIKSDIGAILRKLCDQKGVEIIEANACKDHINMLVSIPPKLSVSQFMGYL KGKISLMIFDRHANLKYKYGNRQFWCKGYYVDTVGRNKKAIEEYIKNQIQEDIAYEQISLKEYIDPFTGEPIKKNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SP_1064 | NP_345538.1 | IS200 family transposase | Not tested | PPI-1 | Protein | 5e-54 | 74 |
| CPR_0382 | YP_697711.1 | IS1469, transposase | Not tested | Not named | Protein | 2e-48 | 71 |
| EF0615 | NP_814372.1 | IS200 family transposase | Not tested | Not named | Protein | 4e-39 | 64 |
| ef0123 | AAM75324.1 | EF0123 | Not tested | Not named | Protein | 2e-39 | 64 |
| tnpA | NP_455584.1 | transposase for insertion sequence element is200 | Not tested | SPI-5 | Protein | 2e-44 | 63 |
