Gene Information

Name : hemC (CPE1435)
Accession : NP_562351.1
Strain : Clostridium perfringens 13
Genome accession: NC_003366
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 1693000 - 1693875 bp
Length : 876 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGGAATTAATAATAGCGACTAGAAAAAGTAAGTTAGCACAAGTGCAAACTGAAAAAGTTATGGAACTTTTAAAGGGAAA
AGAAAATGTAGATAGTAAGAAACTTTTAGTTATGACAGAAGGTGATAGAAGACTAGATGTTTCATTAAATAAAATAGGTG
GAAAGGGTCTATTTGTAAAGGAGATAGAACTAGCTCTTTTAAATAAAGAAGCTCATGGAGCAGTTCATAGTATGAAAGAT
GTTCCTTTTGAACTTCCTAGCGAATTTGAGCTTGTTGCAATGCCTGAAAGAGAAGATATAAGAGATGCCTTTGTATCTTT
AAATGGATCCACTTTATCTAATTTAAGAAAAGGAGCTAGAATAGGAACTAGCAGTATAAGACGTGCAGAGCAATTAAAGT
TATTTAGAGATGACTTAGAGATTGTTCCAATTAGAGGTAATGTTCAAACTAGAATAAAAAAAATAACTGAAGAAAATTTA
GATGGAATAATTTTAGCGGCAGCAGGATTAAAAAGACTTGGTATGGAAGATGTAATAAGTGATTATTTTGATCCAAAGGT
ATTTTTACCTGCTATTGGTCAAGGAGCTTTAGGAATAGAGTGCTTAAAAGGTGGAGAATTTAATGACTATTTTAAAGCTT
TAGATAGCAAAGAGGTTAGAACTACTGTTGAAGCTGAAAGAAGCTTTATGAAGGTATTAAACGGAGGATGTCATAGTCTT
ATAGGTGCTTATTCAGAGGTTAAAGATAATGACTTATATATGATAGGTACATTTACTGTAAATAATAGAATAGTTAAAAA
AGATATATTAGGAAATAAAGAAGATAATATATTATTAGGAAAAAAACTTGCAGAAAAAATATTAGAAGAGGTATAG

Protein sequence :
MELIIATRKSKLAQVQTEKVMELLKGKENVDSKKLLVMTEGDRRLDVSLNKIGGKGLFVKEIELALLNKEAHGAVHSMKD
VPFELPSEFELVAMPEREDIRDAFVSLNGSTLSNLRKGARIGTSSIRRAEQLKLFRDDLEIVPIRGNVQTRIKKITEENL
DGIILAAAGLKRLGMEDVISDYFDPKVFLPAIGQGALGIECLKGGEFNDYFKALDSKEVRTTVEAERSFMKVLNGGCHSL
IGAYSEVKDNDLYMIGTFTVNNRIVKKDILGNKEDNILLGKKLAEKILEEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-44 43
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-44 43