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Name : CPE1217 (CPE1217) Accession : NP_562133.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0609 EC number : - Position : 1420883 - 1421941 bp Length : 1059 bp Strand : - Note : similar to pir:G75619 probable hemin ABC transporter, permease from Deinococcus radiodurans (strain R1) (354 aa); 37.9% identity in 282 aa overlap. N-terminal signal sequence and 8 transmembrane regions were found by PSORT.; permease DNA sequence : TTGTTTAATTTAAGTTGGAGAAAAGACAAAAAAGTTTTCATTGCAGTTTTATTAATTTTACTTTTTATATCATCTATAAT ATTAGGAATATCTTTTGGAGCTGTTGATATTCCACCTTATGATGTTTACAGAGTATTTTTATATAAGGTTTTTGGAATTA AGATTGGTAATTTAGATGAAATATTAAATAGCACTTTATTTGATATAATATGGGGAGTAAGAATGCCAAGAGTGCTTTTA GGAGCTTTTGCAGGTATGGCCTTAGCTATGGTTGGTGTAATTATGCAAGCTACTATACAAAACCCTTTAGGAGATCCTTA CATACTAGGATTGTCATCTGGAGCATCTTTAGGTGCTACATTTTCAATACTAATAGGATTTTCAGGAGTATTATCAAGCT TTGGCGCACCCTTAGGAGCATTTTTAGGAGCTTTAATTGCATCTATATTTGTGTACTTTTTAGCGAAAATAGGTGGGCGT ATAACTCCTTTTAAGATGATATTAGCTGGTATGGTTATAAGTTCTATATGTTCATCACTTACAAGCTTAATAATATTTTT ATCAAAGGATAATGAAGGCATAAGAACAGTTAACTTTTGGATGATGGGAAGTTTGGCAGGAGCACAATGGAGTAATATAG TTCTTCCCATAGCAATATCAGTTATACCACTAATATACTTCTTTACTCAATATAGAAATTTAAACTTAATGGTATTAGGA GATGAAACATCTATTACCTTAGGGTTAAATATTGAAAAGCATAGAAAAATATATATGATACTTTCATCTTTAATAACTGG AGTTATTGTATCAGTATGTGGAACTATAGGCTTTGTTGGAATTATGATTCCACACATTGTAAGACTTATATTTGGAACGG ATCATAAAACTTTACTACCTTTTAGTGCTTTAGTTGGAGCTATATTTCTTATATGGGCAGATGTAATTGCTAGATGTGCT ATTAATAATATGGAACTTCCTATAGGAATAATTACCTCTGTAATAGGAGCCCCTTTCTTATTATGGCTTATGGTAAAAGG AACTAGAGAAAAGGAGTAA Protein sequence : MFNLSWRKDKKVFIAVLLILLFISSIILGISFGAVDIPPYDVYRVFLYKVFGIKIGNLDEILNSTLFDIIWGVRMPRVLL GAFAGMALAMVGVIMQATIQNPLGDPYILGLSSGASLGATFSILIGFSGVLSSFGAPLGAFLGALIASIFVYFLAKIGGR ITPFKMILAGMVISSICSSLTSLIIFLSKDNEGIRTVNFWMMGSLAGAQWSNIVLPIAISVIPLIYFFTQYRNLNLMVLG DETSITLGLNIEKHRKIYMILSSLITGVIVSVCGTIGFVGIMIPHIVRLIFGTDHKTLLPFSALVGAIFLIWADVIARCA INNMELPIGIITSVIGAPFLLWLMVKGTREKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDCE8392_1769 | YP_005134303.1 | ferrichrome transport system permease protein fhuB | Virulence | Not named | Protein | 1e-24 | 41 |
