|
Name : CPE0985 (CPE0985) Accession : NP_561901.1 Strain : Clostridium perfringens 13 Genome accession: NC_003366 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG1288 EC number : - Position : 1186397 - 1187905 bp Length : 1509 bp Strand : - Note : similar to sp:YFCC_HAEIN HYPOTHETICAL PROTEIN HI0594. from Haemophilus influenzae (509 aa); 46.9% identity in 493 aa overlap. N-terminal signal sequence and 11 transmembrane regions were found by PSORT. DNA sequence : ATGAGTAAAAAGAAAAAAATTTCGTTCCCTACAGCCTTTACTGTATTATTTATTGTTTTAATTTTATCAGCTATTTTAAC TTATGTGATTCCAGCAGGATCATATTCAAAGTTGTCTTATAATGAAGCTGAAAATACCTTTATTGTTACAAATCCTCAAG GGGAAAGCACTAAGGAAGCTGCAACCCAAAATACCTTAGATAAACTTGGTATAAAAATAGACTTAAGTAAATTTACTGAT GGAAGTATAAATAAGCCAATAGCTATACCAAATACTTATGAAAAGGTTGCTCAAAATCCTCAAGGTATTGCCCAAATAAT AGAAGCTCCTATTCAAGGAACTTATGACACTATAGATATAATTATGTTCGTTTTAATAATTGGTGGAGTAATAGGAGTTT TAAATACAACTGGAGCATTTAATGCTGGAATTGCTAGCCTTTCTAAAATAACTAAGGGAAAAGAATATATACTTATAATA TTATTATCAATACTTATTTCTCTTGGTGGTACTACTTTTGGATTGGCAGAAGAAACAATTGCTCTTTATCCAATTCTGCT CCCAATCTTCCTAGCTTCTGGCTATGATGCTATAGTTTGTATAGCCACAATATACATGGGTTCATCTATAGGAACAATGT TCTCAACTGTAAACCCATTCTCTTCAGTAATAGCTTCAACAGCTGCTGGAATAAGCTTTAAAGAAGGCCTTGATTTTAGG ATGATAGGATTAGTTTTAGCTACACTTATAACAATAATTTATATACTTAGATATGCTAAAAAAGTTAAAAACGATCCTTC TAAATCCCTTGTATATGATCAAAAAGATGAAATAGATTCTAAATTCCTTCATGAATCTAGTAATGATGTGCCAGTATTTA CTTGGAGACTTAAACTTATGCTTTTAATCTTCGCTGGTTCATTTATAATTTTAGTTTATGGAGTTTCAGCTAAAGGATGG GGATTTATACAAATGACTGCTCTATTCCTTGTAGTTGGAATAATTTTAGGATTCCTTTCAGGACTTGGAGAAAAGAAATT TGTTAATACCTTTATAGCTGGTGCTGCTGATTTAGTAGGAGTTGCCTTAGTTATAGGTGTTGCAAGATCTATAAACTTAA TACTTGAAAATGGTAAAATATCAGATACTTTACTTTATGTATCCTCAAATGGAATTCAAGGTATGGATAAAAATATATTT ATAATATTAATGCTTGTTATATTCATAATCTTAGGATTCTTTATTCCATCTTCATCTGGTCTTGCTGTTTTATCAATTCC AATAATGGCACCACTTGCAGATACAGTTGGTTTACCAAGGGATGTTATAGTTAGTGCTTACCAATTTGGTCAAGGATTAA TCTCCTTTATAACTCCAACAGGATTAATTTTAGCTACCCTTGCTATGGTTGATGTAACCTATAATAAATGGCTGAAATTT ATTATGCCTTTAATGGGAATTATAGCAGCCTTTGCAGCCTTACTATTATTAGTACAGGTACACTTTTAA Protein sequence : MSKKKKISFPTAFTVLFIVLILSAILTYVIPAGSYSKLSYNEAENTFIVTNPQGESTKEAATQNTLDKLGIKIDLSKFTD GSINKPIAIPNTYEKVAQNPQGIAQIIEAPIQGTYDTIDIIMFVLIIGGVIGVLNTTGAFNAGIASLSKITKGKEYILII LLSILISLGGTTFGLAEETIALYPILLPIFLASGYDAIVCIATIYMGSSIGTMFSTVNPFSSVIASTAAGISFKEGLDFR MIGLVLATLITIIYILRYAKKVKNDPSKSLVYDQKDEIDSKFLHESSNDVPVFTWRLKLMLLIFAGSFIILVYGVSAKGW GFIQMTALFLVVGIILGFLSGLGEKKFVNTFIAGAADLVGVALVIGVARSINLILENGKISDTLLYVSSNGIQGMDKNIF IILMLVIFIILGFFIPSSSGLAVLSIPIMAPLADTVGLPRDVIVSAYQFGQGLISFITPTGLILATLAMVDVTYNKWLKF IMPLMGIIAAFAALLLLVQVHF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAUSA300_1064 | YP_493762.1 | TRAP family protein | Not tested | vSa¥ã | Protein | 4e-97 | 48 |
| SAV1171 | NP_371695.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 1e-96 | 48 |
| SA1014 | NP_374287.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 1e-96 | 48 |
| SAKOR_01092 | YP_008491280.1 | Arginine/ornithine antiporter | Not tested | vSa¥ã | Protein | 6e-97 | 48 |
| MW1052 | NP_645869.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 4e-97 | 48 |
| SACOL1183 | YP_186046.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 4e-97 | 48 |
