Gene Information

Name : PAE2819 (PAE2819)
Accession : NP_560275.1
Strain : Pyrobaculum aerophilum IM2
Genome accession: NC_003364
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1666365 - 1667375 bp
Length : 1011 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGTCGGTGGTGGGGAGTTTTGAACAGCTGGAGAGGTTGAGGGATTTGTTTTACAAACTCCTCGACTTAAGGGACACACT
GCGTGAGAGGGGGGTGGCGTGGCCTAAGCCTCTTTCTGAGGAGGCGGCCCTCGGCACTGTGAGGGTTAAGGTGGGGTTCC
CCGCGATGTTGAAGAGGGGGGTGATTATGGACGTGACAAACGTGGAGCAAGCCCAAATCGCTGAGGACGCCGGGGCGGTG
GGAGTAATGGTGTTGGACAAACTGCCTTATGACGTGAGGAGGGCGGGCGGCGTGGCCAGAATGGCGGATTTAAAGGTTAT
TGAGGAGGTCATGGCCCACGTGACTATCCCAGTGTCCGCCAAAGTGAGAATTGGCCACTACTACGAGGCTTTTCTGTTAG
AGCAAGTCGGCGTTGACTTAATAGACGAGTCTGAGGTATTGACTCCAGTGGATGAGCAACACCATATAAATAAGTGGATG
TTCACAGTGCCCTTTGTAAACGGGGCTAGGGAGCTCTGTGAGGCGTTGCGGAGGATTTCAGAGGGGGCCTCCATGATTAG
ATCTAAGGGAGAGGCGGGGACTGGCAACGTGGCCGAGGCCGTCAAGCACTTCAAGTCTATATACGGAGCTATAAAATCGC
TGGCAGCTGGCGACGAGGAGAGAGTCAGGGATTTCGCCAGGCAGTGCCAAGTGCCCTTTGAGCTCGTGGCCCTCACCGCT
AAATTACAAAGGCTGCCCGTCATTACATTCGCCGCGGGGGGCATAGCCACTCCCGCCGACGCCGCCCTTATGATGTGGCT
CGGAGCTGACGGCGTGTTCGTGGGCTCTGGGATTTTCAAATCGCAAGACCCCAGGGAGAGGGCTGAGGCCATTGTCTTGG
CCACTGCCCACTGGGACGACCCGGAGACTGTAGTAGAGGCGCAGAAAATGGTCAGCGAGAGAGGCGCCATGATGGGAATA
GATATAAGGACTTTGAAGCCTGAGGAGCTTTTACAGACTAGAGGCGTATGA

Protein sequence :
MSVVGSFEQLERLRDLFYKLLDLRDTLRERGVAWPKPLSEEAALGTVRVKVGFPAMLKRGVIMDVTNVEQAQIAEDAGAV
GVMVLDKLPYDVRRAGGVARMADLKVIEEVMAHVTIPVSAKVRIGHYYEAFLLEQVGVDLIDESEVLTPVDEQHHINKWM
FTVPFVNGARELCEALRRISEGASMIRSKGEAGTGNVAEAVKHFKSIYGAIKSLAAGDEERVRDFARQCQVPFELVALTA
KLQRLPVITFAAGGIATPADAALMMWLGADGVFVGSGIFKSQDPRERAEAIVLATAHWDDPETVVEAQKMVSERGAMMGI
DIRTLKPEELLQTRGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 6e-63 56
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-63 56
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 8e-63 56