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Name : tkt (CCA00875) Accession : NP_829738.1 Strain : Chlamydophila caviae GPIC Genome accession: NC_003361 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 997833 - 999830 bp Length : 1998 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGGTAAACAGGGAAGTAGACGTAGATATCTTGGAAAAGATCTCAGGAACTCTTAAACAGTTAAGTATAGAGATCATTCA GAAAGCGGGTTCTGGTCATCCGGGATTGCCTTTGGGTTGTGCGGAACTTGCCGCGTACCTGTATAGTTATGTTTTGAGAC ATAACCCAAAAGATCCTTTATGGATTGATAGGGACAGGTTTGTTTTGTCAGCAGGGCATGGTTCAGCGTTACTATATGCC TGCCTTCACCTTGCTGGATATGATGTTTCTTTAGAGGATCTTCAGCAGTTTCGTCAGTTGCATTCACGAACTCCTGGTCA TCCAGAATTTGGAGAAACTGAGGGCGTTGAAGCTACTACAGGACCTTTAGGTCAGGGTGTAGGTAATGCTGTAGGTATGG CTTTATCTATGAAGATGCTTCAAGTGCGCTTTAATCGCCCTGAACATGAAATTTTTAACGGTAAGGTGTATTGCCTAGCC GGTGACGGATGCATGATGGAAGGTGTTAGCCATGAAGTCTGTAGCTTGGCAGGGACATTAGGCTTAGATAATCTTGTCGT TATATATGACTACAATAACATTGTTTTAGACGGCTTCTTAGGAGAAGTAAGTTCTGAAGATGTTAAAAAGCGTTTTGAAT CTTACGGCTGGGAAGTTTATGAAATCGATGGCTATGATTTTTCCTCGATTCATGAAACGTTTGTAAAAATTAAACAGTCG CAACAGCGTCCTGTATTAATAGTAGCCCATACGATTATAGGGCACGGCTCTCCTAAGGAAGGAAGTCATAAGGCTCACGG ATCGCCTTTAGGTGAAGATGGCGTAGAACAGACAAAACGTTTCTGGCATCTTCCTGAGGAAAAATTCTTCATTTCTCCTG CAGTGAAATCCTTCTTTTCCCATAAATTACAAGAAGATCGTAAAGTGCAAGAGGAATGGCAGAATGATTTCCGTGTTTGG TCACGTCAATTCCCCGATTTACATCAAGAATTTCTTTCTCTAAAAGCGCCGATATCCTCTGAAACATTAGAGACAATACT TGAAAGTGTGGAAATGCCAGAAGTCATAGCTGGTCGTGCCGCATCTAACAAGATAATTCAAAATTTAGCTAAGAATATCC CTTCACTTATTGGGGGATCAGCAGATTTATCAAGTTCAGATGGAACCTGGATAGCAGAGGCTAAAGAAATTAATAGCCAA GACTTCTCCGGCAGGAATATTAAGTATGGTGTTCGAGAATTTGGTATGGGAGCCATTATGAATGGTTTAGCCTATTCTCA AGTATTTCGACCTTTTGGAGGAACATTCTTAGTATTCTCTGATTATTTAAGAAATGCTATTCGTTTAGCAGCATTGGCTA AGCTCCCTGTTATTTATCAATTTACTCATGACTCTATTTTTGTTGGTGAGGATGGTCCTACACATCAACCTATCGAACAG ATCATGTCATTAAGAGCTATCCCAGGTCTGCAAGTTATCCGCCCTGGAGATGCCAATGAAGTGAAGGGGGCTTGGCATGC AGCATTGCGTCATCTTGGCCCTACAGCATTGATTCTTTCTCGACAAAACTTGCCTACATTAGCACAGACAGACAGACCAT TTAAAGAGGGTGTGGGACGTGGTGCTTATATTGTTTTAAAAGAGACCGAAGGTAAGCCCGACTATACTTTATTTGCTACG GGATCAGAATTGCATTTAGCATTAGCTGTAGCTCAGGAGCTGATTTACTTAGATAAGAAAGTTCGAGTCATTTCCTTCCC ATGTTGGGAATTATTTGAACAACAAGATTTTGAATATCGAGAAAGTGTGGTCGGTGGTGATTTAGGTTTGCGAGTCTCCA TAGAAGCGGGATCTGCATTGGGTTGGTATAAGTATATCGGTCTCGATGGTTTGGCTATTGCTATGGATAGATTTGGCTAT TCGGGAGCTCCCGCTGATGTAGCGGAAGCTTGTGGATTTACTGCGGACTGTATTTTACAGAGAATACTTTCTCAATAA Protein sequence : MVNREVDVDILEKISGTLKQLSIEIIQKAGSGHPGLPLGCAELAAYLYSYVLRHNPKDPLWIDRDRFVLSAGHGSALLYA CLHLAGYDVSLEDLQQFRQLHSRTPGHPEFGETEGVEATTGPLGQGVGNAVGMALSMKMLQVRFNRPEHEIFNGKVYCLA GDGCMMEGVSHEVCSLAGTLGLDNLVVIYDYNNIVLDGFLGEVSSEDVKKRFESYGWEVYEIDGYDFSSIHETFVKIKQS QQRPVLIVAHTIIGHGSPKEGSHKAHGSPLGEDGVEQTKRFWHLPEEKFFISPAVKSFFSHKLQEDRKVQEEWQNDFRVW SRQFPDLHQEFLSLKAPISSETLETILESVEMPEVIAGRAASNKIIQNLAKNIPSLIGGSADLSSSDGTWIAEAKEINSQ DFSGRNIKYGVREFGMGAIMNGLAYSQVFRPFGGTFLVFSDYLRNAIRLAALAKLPVIYQFTHDSIFVGEDGPTHQPIEQ IMSLRAIPGLQVIRPGDANEVKGAWHAALRHLGPTALILSRQNLPTLAQTDRPFKEGVGRGAYIVLKETEGKPDYTLFAT GSELHLALAVAQELIYLDKKVRVISFPCWELFEQQDFEYRESVVGGDLGLRVSIEAGSALGWYKYIGLDGLAIAMDRFGY SGAPADVAEACGFTADCILQRILSQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-129 | 46 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 7e-123 | 45 |
