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Name : popF2 (RSp0900) Accession : NP_522461.1 Strain : Genome accession: NC_003296 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 1136189 - 1138399 bp Length : 2211 bp Strand : + Note : predicted by Codon_usage; predicted by Homology; predicted by FrameD DNA sequence : ATGAGTACAAACATTTCCGGAGCGGCAAGCCCGACCTTGCCGTCAGCCGGGGCGGGCGCCAACGGGCCGGTCGCGAACCC TCCCGACCTTCCGTCCTCCCTGTTATTCCAGTTCGATCACCCCACCGGGCCGAGCCGTCCGGACCTGCCGCCCGAGCTGT TCTTCAAGCTCGACGAGTCGATCGCGCGCGCGATGCAGGGCGCGGCGCAGCAGTCGCCCGATCCGTCGGCGGGTCCGGAA AGCCAGGGCAACCAGCCAGCCCCCGTTGACGCCGCGCCACCGCAGGAGAGCCGGCCCGCCGATCCCCCGCTGGGCAGCGA CGTGACCGAAACCGGCGGGACGCCGTCGCCTCTGCAGTTGCAGATTCTCGGCACCCTGAGTCTGTACCTCAACGCCCGGG GCCTGCCGTTCGGCGAGCGCGTGATGACCCGGCAGTCGCTTGAAAGGGCGGCCAACAATGCCGATGCGCCGGCCGACCTG CGTGCGGCCGCGCAGGCGATGCTGAGCGATCCCGCCCTGTACCAGGCCATCGGCGGCAACGACGGGAAGTTCGCGCGCAA GGACATCGACAAGTTCGCCAAGTCCCACCCGCAGGTCCTGACCCGGAACAGCGGCACGCTCACTGACAGCCAGCTGGAAA TCATGTCCATCCTGGCCCGCCACAAGGACCAGCTGCCGGTCGGCTGGCAGTCGATCCAGGACAAGATCAACGATCCCAGC ACGCCGCCTGACCTGAAGGCTGCGCTGCAGGTGCTGGCCAACGATCCGGCGCTGTTCTCCGCCCTGGGCTCGCCGGGCAA GGGCCACAAGCACAAGGCATCCGGGGACTACCGGATCACGGCCGGCGATGTGAGTCGCTTCATCGACAAGCACCCGCAGG TGGAGGAGTACAACCGCAAGAAAGCCGAAGGCTATGTGAAGAACTACATCCCGTCCGACGCGAAGCCGGGCGACAAGCCT TCGGCCATGACGCAGAACGATGCGCTGCGCGAGCTGTACCGCTACTCCGACTACCTGCCGAAGAAGCTGGACATGGAAGC CTTCCAGCGCATCGTCGACGGCGACTCGGACGTCAAGAAGGCGCCGCCGCAGGTGATCGCCGCGGCCGAGTATTTCCTGC AGAACCGCAACGAGTGGGCGAGCCTGAACAAGATGGACGACCCCGACAAGCGGGTGGGCAAGTCGGACTTCCTGCAGCGC GCCGCCTCGGCCGTGCACCTGAGCAAGGAAGATCTGCAGACCGTGTCGACCATCAACAGCAATCTCGACGTGTTCTTCAA GGACGGCCAGAAGATCACCCGCGACCGGCTGGCGGCGATGTCGCAGGACGAGAGCCTGTCTCCGGCCGTGCGCAACGCGG CCAAGCAGCTGCTGCAGGATCCGCTGCTGTACGGGCTGATCAACAACGCGAACTCGGGCTACAAGACGAAGAACGGCTTC TTCAGCTTCGGCGGCCCGACGGTGGATTCCGGCGTGATCGGCAAGAAGGACTTCGAGAAGTTCATGTCGAGCATGACGGA CGCCAACAAGACGGTCCAGGCGCGCAAGACGCATCCGGCCAACTCGGAGGCCAGCAAGAGCGCCGTTGCCGACATGGGTA TGGGCATGGAAGACCAGCCCGACATCAAGGCGGTCAAGAAGAGCGGCGGGGCCCTGAAGAAGGCCATGGACAAGATCCTC ACCATCTACTCGAAGGTGATGGACATCGCGTCGCAGGTCGTCGGTGCGCTGGGCATGATTCCGGGGCTGGGTGAAATCGC GGACGCGCTGTCGATGGGGATGGCCGCCGGGGCCTCGGCGGCCAAGGTGCTGTCGACCCTGCTGAACGGCGGCAGCCTCA AGAAGGCGCTGGCGGAGGCGGGCATCAACCTGGCCTCTGCCGCGCTGGGGGCCGTCGCCGGGCCGGAGGCGCGGGTGGCG CTCAAGAACGGCCTGACCAAGATGCTCGTGGAGAAGGTGGCCAACACCGGCATCGATCTGGCGGTCGACAAGGCGAAGTC GTTCGTGGATGGTTACCTGCAGGACCTGAAGGGCCGTCTGCACGCCACCGCGGCCAACGCCGTCAACACGGTCAACACCG GCGTCAACTGGGTGTCGGACAAGACGAAGGACTTCCTGGAGAACCCGGTGCAGAACCTGACGCCCCGTGTGAATATCCCC GGTATCACCCCGTATCAGCCGGGCTATCCGGTGGTGGCGCCGGCGGCCTGA Protein sequence : MSTNISGAASPTLPSAGAGANGPVANPPDLPSSLLFQFDHPTGPSRPDLPPELFFKLDESIARAMQGAAQQSPDPSAGPE SQGNQPAPVDAAPPQESRPADPPLGSDVTETGGTPSPLQLQILGTLSLYLNARGLPFGERVMTRQSLERAANNADAPADL RAAAQAMLSDPALYQAIGGNDGKFARKDIDKFAKSHPQVLTRNSGTLTDSQLEIMSILARHKDQLPVGWQSIQDKINDPS TPPDLKAALQVLANDPALFSALGSPGKGHKHKASGDYRITAGDVSRFIDKHPQVEEYNRKKAEGYVKNYIPSDAKPGDKP SAMTQNDALRELYRYSDYLPKKLDMEAFQRIVDGDSDVKKAPPQVIAAAEYFLQNRNEWASLNKMDDPDKRVGKSDFLQR AASAVHLSKEDLQTVSTINSNLDVFFKDGQKITRDRLAAMSQDESLSPAVRNAAKQLLQDPLLYGLINNANSGYKTKNGF FSFGGPTVDSGVIGKKDFEKFMSSMTDANKTVQARKTHPANSEASKSAVADMGMGMEDQPDIKAVKKSGGALKKAMDKIL TIYSKVMDIASQVVGALGMIPGLGEIADALSMGMAAGASAAKVLSTLLNGGSLKKALAEAGINLASAALGAVAGPEARVA LKNGLTKMLVEKVANTGIDLAVDKAKSFVDGYLQDLKGRLHATAANAVNTVNTGVNWVSDKTKDFLENPVQNLTPRVNIP GITPYQPGYPVVAPAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpF | NP_640749.1 | HrpF protein | Virulence | Hrp PAI | Protein | 5e-95 | 41 |
| hrpF | AAP34358.1 | HrpF | Virulence | Hrp PAI | Protein | 1e-94 | 41 |
