Gene Information

Name : hpaB (RSp0853)
Accession : NP_522414.1
Strain :
Genome accession: NC_003296
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1083503 - 1083958 bp
Length : 456 bp
Strand : -
Note : Product confidence : hypothetical; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD

DNA sequence :
ATGAGCCTTGAGCAACGCGATGCACTGGTCCGCGACATGTGCGCCCATCTGGGAATCCCGGATGCGGAGGCCATCCTGTC
CGCCGGCCGGCTCACCGTGGAAGGCTTCGACGTCATCATCGACGCCGTCGAGGACGACCCCGCGGCGTTCTACCTGAACT
TCGACTACGGCATCGTCACCGGCGGCCGCACCCTGCGCGTTTTCCGGCTGATGCTGGAAGCCAACCTCACCATCTACGCG
CAGGACCACGCCCAGCTCGGCCTGGACGGCGATACGGGCGGGATCATCCTGATCGTCCGCGTCGCCTACGCGCCCGACCT
GAACGGCGAGCAGCTGGCCGAATTGCTGGGCCATTATGCAGAACACGGACGCTACTGGCGGGACAACATACTGCAGACCA
CCGACGACATGTTCGAAAGTCTGTCAAACGGCACTTACCTATGGATTCGCGCATGA

Protein sequence :
MSLEQRDALVRDMCAHLGIPDAEAILSAGRLTVEGFDVIIDAVEDDPAAFYLNFDYGIVTGGRTLRVFRLMLEANLTIYA
QDHAQLGLDGDTGGIILIVRVAYAPDLNGEQLAELLGHYAEHGRYWRDNILQTTDDMFESLSNGTYLWIRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaB YP_362147.1 HpaB protein Virulence Hrp PAI Protein 8e-29 48
hpaB YP_198714.1 protein HpaB Virulence Hrp PAI Protein 3e-29 48
hpaB NP_636594.1 HpaB protein Virulence Hrp PAI Protein 3e-28 48
hpaB AAD21328.1 HpaB Virulence Hrp PAI Protein 5e-29 48
hpaB BAB07868.1 HpaB Virulence Hrp PAI Protein 2e-29 48
XC_3022 YP_244090.1 HpaB protein Virulence Hrp PAI Protein 3e-28 48
hpaB NP_640751.1 HpaB protein Virulence Hrp PAI Protein 5e-29 46
hpaB AAP34355.1 HpaB Virulence Hrp PAI Protein 4e-29 46