Gene Information

Name : tISRso16b (RSp0558)
Accession : NP_522119.1
Strain :
Genome accession: NC_003296
Putative virulence/resistance : Unknown
Product : transposase ISRSO16
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 699723 - 700565 bp
Length : 843 bp
Strand : +
Note : predicted by Codon_usage; predicted by Homology

DNA sequence :
TTGCGCGACCGCTACCGTGTGAGCCTGACCAAGGCTTGCGCGTTGTTTCACATGTCGCGCTCGCTGTACGGGTATCGCTC
GGTTGCTCGCGACTCGTCGGCACTGCTTGCGCGCATCAAAGAGATTGCGGCCAGTCGCGTGCATTACGGCTATCGCCGTG
TGCATGTGATGCTGCAGCGGGAAGGCTGGAGAGACAATCACAAACGCGTCTATCGCTTGTACCGGGCCGAAGGTCTGTCG
CTGCGGCATAAGCGCCCCAAGCGCAACAAGTCGGCGCGGCTACGCCAGCCCAAGAGCATCGTCACGGCCATCAACGAAAT
CTGGAGCATGGACTTTGTATCCGACGCGTTATTCGACGGCCGGCGCCTGCGCGCATTGACGGTCGTGGACAACTACACCA
GGGAATGCCTGGCCATCGAAGTCGGCCAAAGCCTGAAGGGGGAAGACGTCGTGCGAGTGCTCAATGCCGTTGTTGCCCAG
CGTGGCTCACCCCAAACCATCAAGGTGGACAATGGCAGCGAGTTTGTCTCGAAGGCGATGTACCGGTGGGCGTACGAGCA
CGGCGTGGAACTCGACTTCAGTCGGCCAGGCACGCCTCCTGACAATGCCAAGGTGGAAAGCTTCAACGGGCGGTTCCGGC
AGGAATGCCTGAACGAGCACTGGTTCTTGTCCCTGGAGGATGCTCGGGGCAAAATCGCCGACTGGCAGCGGTACTATAAC
GAGAGTCGTCCCCACTCCGCGCTGCAGTGGGCGGCACCCGCCGAATTCGCCCATCAGGCAACGAAAAACGCCTCGACGGA
CGACTCAACGACGCCGGAAATCTCCACTTCTGGACGGTACTAA

Protein sequence :
MRDRYRVSLTKACALFHMSRSLYGYRSVARDSSALLARIKEIAASRVHYGYRRVHVMLQREGWRDNHKRVYRLYRAEGLS
LRHKRPKRNKSARLRQPKSIVTAINEIWSMDFVSDALFDGRRLRALTVVDNYTRECLAIEVGQSLKGEDVVRVLNAVVAQ
RGSPQTIKVDNGSEFVSKAMYRWAYEHGVELDFSRPGTPPDNAKVESFNGRFRQECLNEHWFLSLEDARGKIADWQRYYN
ESRPHSALQWAAPAEFAHQATKNASTDDSTTPEISTSGRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 6e-71 64
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 9e-55 48