Gene Information

Name : tISRso16a (RSp0557)
Accession : NP_522118.1
Strain :
Genome accession: NC_003296
Putative virulence/resistance : Unknown
Product : transposase ISRSO16
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 699424 - 699690 bp
Length : 267 bp
Strand : +
Note : predicted by Codon_usage; predicted by Homology; predicted by FrameD

DNA sequence :
ATGAAGACGAGCAAGTTCACCGAGGCGCAGATAGCGTTCGCATTGAAGCAGGCGGAGCTAGGTACGAAGGTTGAGGAGGT
GTGCCGCAAGCTGGGCATCAGCGAAGCGACGTTCTACAACTGGAAGAAGAAGTACGGGGGCGTCGGCCCTTCGGAGCTGC
GCCGGATGCGGCAACTCGAGGAAGAGAACACGAAGCTCAAGCGGCTGGTGGCGGATCTGAGCCTGGACAAGGCCATGCTG
CAGGACGTGTTGTCAAAAAAGCTCTGA

Protein sequence :
MKTSKFTEAQIAFALKQAELGTKVEEVCRKLGISEATFYNWKKKYGGVGPSELRRMRQLEEENTKLKRLVADLSLDKAML
QDVLSKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 5e-28 75
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 7e-28 75
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 1e-18 49
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 2e-14 47
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 2e-14 47
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 5e-14 46
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 5e-14 46