Gene Information

Name : RSp0468 (RS00346)
Accession : NP_522029.1
Strain :
Genome accession: NC_003296
Putative virulence/resistance : Virulence
Product : general secretion pathway GSPG-like transmembrane protein
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 584868 - 585302 bp
Length : 435 bp
Strand : -
Note : -

DNA sequence : 
ATGACCGTATCGTCGAAACTGAACAGGATGCAGGAAGCCCGCGGCTTTACCCTGCTTGAGCTGCTTGTCGTGGTCGCCAT
CATCGGCCTGCTGGCCGCCTATGTCGGGCCGCGCTACTTTGCGCAACTGGGCAAGTCGGAAGTGGGCGTGGCCAAGGCAC
AGCTCCAGGCGTTCGAGAAGGCCGTCGACCAGTACCGGCTCGACACGGGGCATTTCCCCACGACCGAACAGGGCCTCAAG
GCGCTGACCAGCGCGCCCACGGGCGAAACGCGCTGGGGCGGCCCCTACCTGAAGAAGGACGTACCGCTCGATCCGTGGGG
CCACGCCTACGAATACCGGCAGCCCGGCGCCAACGGCCGCGAGTACGACATCGTCTCTTACGGTCGCGACGGCGCGGCCG
GCGGCGAAGGCGAGAACGCCGATCTGACGAACTGA

Protein sequence : 
MTVSSKLNRMQEARGFTLLELLVVVAIIGLLAAYVGPRYFAQLGKSEVGVAKAQLQAFEKAVDQYRLDTGHFPTTEQGLK
ALTSAPTGETRWGGPYLKKDVPLDPWGHAYEYRQPGANGREYDIVSYGRDGAAGGEGENADLTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 4e-12 44
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-12 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSp0468 NP_522029.1 general secretion pathway GSPG-like transmembrane protein VFG0180 Protein 6e-14 44
RSp0468 NP_522029.1 general secretion pathway GSPG-like transmembrane protein VFG2050 Protein 1e-12 44
RSp0468 NP_522029.1 general secretion pathway GSPG-like transmembrane protein VFG1871 Protein 3e-11 42