Gene Information

Name : RSp0464 (RS00952)
Accession : NP_522025.1
Strain :
Genome accession: NC_003296
Putative virulence/resistance : Virulence
Product : GSPE-like protein
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 580532 - 581776 bp
Length : 1245 bp
Strand : -
Note : -

DNA sequence :
GTGGCTCTGAGCACGGCTTCGGCGTCCGCCCTGCTAGCCCAGCGAGGCGCGGAAAAGACGGTCCAGGACCAGGACGTCGG
CCGTGTCGTCTCCCACGACTCCATCGAATCGACGGAAAGCGCCGTCGTGCGCTTCCTCGACGCGGTATTGCTCGACGCCT
GGCGGGCCGGCGCCAGCGACATCCACGTCGAGACCTCCCGCTCCGGCTTGCACATCAAGCTGCGGCTGGACGGCGTGCTG
GTGCCCGGCCCCGCGTTCACCGGTGCGCGCTCGCCCAGCGAAGTGCTGAACCGGATCAAAGTGCTGGCCCAGCTGGATAT
CGGCGAGACCCGGCTGCCGCAGGACGGCCGCTTCCGCGTGCGGCTGGAGGGGCGCGATGTCGACATGCGGGTCTCCATCA
TGCCCAACGTGTTCGGCGAGGACGCCGTCATCCGCTTGCTGGACAAGGCGCAGTTGCGCGGCGCATCGGAAACGCTCACG
CTCGAGGCGCTGGGCTTCGACACCGCGGCCACCGCCACCATCCGCCGGCTGACCAAGGAGCCGCACGGCATGCTGCTGGT
GACCGGCCCCACCGGCAGCGGCAAGACCACCACGCTGTATGCCGCGCTCTCCGAAATCAACACCGGGCGCGACAAGATCA
TCACGATCGAAGACCCGGTCGAATACGAGCTGTCGGGCATCCTGCAGATTCCCGTCAACGAAAAGAAGGGCCTGACCTTT
GCCCGCGGCCTGCGCTCGATCCTGCGCCACGACCCGGACCAGATCCTCGTCGGTGAAATCCGCGACCCCGAGACGGCGGA
GATTGCGGTGCAGGCCGCGCTGACCGGGCACTTGGTCTTCACGTCCGTGCACGCGAACTCGGCGCTCGACGTGGTCGGCC
GCTTCCTGCACATGGGGGTCGACCCCTACAACTTCATGTCGGCGCTGATCGGCATCGTGTCGCAGCGGTTGCTGCGCCTG
AAATGCCCGGAATGCGCGCCTGCTTCTCCGGATCCGGGCAGCCGGTCCGTCGGGTGCCCAGCCTGTCGGTACACCGGGTA
CCGAGGTCGTACCGTTGTCTGGGAAATCGTCCCCGTCAATGACACGATCCGTGAGCTCGTGATCCAGCGCGAGCCGCTGC
GGCTGATCCGCGAGCAGAGCCGACAGATGGGCGTGGTGTCGTTGCGCGACCAGGCGGTGCGCATGGTGGAGCGTGGCCTG
ACGACGTTTGAGGAAATCGACCGCGTGGTGTCGCCCAATGAATGA

Protein sequence :
MALSTASASALLAQRGAEKTVQDQDVGRVVSHDSIESTESAVVRFLDAVLLDAWRAGASDIHVETSRSGLHIKLRLDGVL
VPGPAFTGARSPSEVLNRIKVLAQLDIGETRLPQDGRFRVRLEGRDVDMRVSIMPNVFGEDAVIRLLDKAQLRGASETLT
LEALGFDTAATATIRRLTKEPHGMLLVTGPTGSGKTTTLYAALSEINTGRDKIITIEDPVEYELSGILQIPVNEKKGLTF
ARGLRSILRHDPDQILVGEIRDPETAEIAVQAALTGHLVFTSVHANSALDVVGRFLHMGVDPYNFMSALIGIVSQRLLRL
KCPECAPASPDPGSRSVGCPACRYTGYRGRTVVWEIVPVNDTIRELVIQREPLRLIREQSRQMGVVSLRDQAVRMVERGL
TTFEEIDRVVSPNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 3e-75 46
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-75 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSp0464 NP_522025.1 GSPE-like protein VFG2048 Protein 3e-75 46
RSp0464 NP_522025.1 GSPE-like protein VFG0182 Protein 7e-74 45
RSp0464 NP_522025.1 GSPE-like protein VFG2426 Protein 7e-64 43
RSp0464 NP_522025.1 GSPE-like protein VFG1876 Protein 7e-71 43
RSp0464 NP_522025.1 GSPE-like protein VFG0233 Protein 1e-65 41